| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1839 |
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| Symbol | |
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| ID | 3908998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2105084 |
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| End bp | 2106292 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637883733 |
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| Product | major facilitator transporter |
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| Protein accession | YP_485458 |
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| Protein GI | 86748962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.772479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00932819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCGC TGCGTAATCT CGGGTTCGGC CCCGGACGCG CGGTCGTCGT TCTGGCGTTC
ACCCAGATCC TGTGCTGGGG AATCCTGATC TATCCCCCCG TGCTGACGAT GCCGCATCTG
ACCGCGGATC GCGGCTGGTC GCTGACCTTC GGCATGGCGG GATTCTCGCT GGCGCTGGTG
ATCTCCGGGA TCATGTCGCC GATCGTCGGC GGCCTGATCG ACCGGCACGG CGGCAATGTG
GTGATGGCGC CGGGCGCACT CGCCGGCGCG CTCGGGCTGG CGCTGCTCGC CACCACCGAT
GCGCGGCCGA TGTACTTCGT CAGCTGGGCG CTGATCGGCC TATCGATGTC GTCGAGCCTG
TACGATCCCG CCTTCGCGAC GCTGGCCCGG CTGTTCGGCA GCTCGGCGCG GCGGCAGATC
ACCTTCGTCA CCTTCGCCGG CGGCTTCGCC TCGACCGTGG GCTGGCCCGC GACTCATCTG
TTGCTCGAGC ATGTCGGCTG GCGCGGCACC TATCTGGTGT TCGCCGCCGT GATGGCGTTC
GTCGTCGCGC CGCTGCACGG CTTCGCGTTG CCGAGGACGC CGTCGCCCTC TCACGGCGCG
GTGGTGTCCG GACCGCATCC GGTGCCGGAG GAGCCGCTGC GGCCGGAAGG GCGGCCGTTC
CTGTTGCTGG CGATGGCGTT CGCGCTGCAT GCGCTGATCC TGTCGGGCGT CACCTCGAAC
CTGCTGTCGA TGTTCGAGCG CGGCGGACTC AGCGCCGCCA CGGTGGTGAC GCTGGGCGCG
CTGTTCGGCC CGGCTCAGGT GGCGGCACGG CTGATCGATT TTCTGCTGGC GGGCCGCACC
CATCCCTTGT GGATCGCGCG CGGCGCGATT GCCCTGATGG CGCTGTCGTT CGCGGTGCTG
GCCTTCGTCG GCGTGTCCGT CCCGGTGGCG GGGCTGTTCT GCATCGCTTT CGGCGCCGCC
AACGGGGTGA TGACGATCGC GCGAGGCAGC CTGCCGCTGC TGATGTTCGG GCACGCCGGC
TATGGCCGGG TGATCGGGCG GATCGCGCGA CCGGCGCTGT TCATCCAGGC GTCGGCGCCG
TTCGTGGTCG CGGCCGCGGT GGAGCGGTTC TCAGACGCCG CGGTGATCGA GGTCGGGATG
CTGGCGGCGC TGGCCGGGCT CGGCTGCTTC CTGCTGATCC GGCCGCCGCA GCCGGCGTCG
CGGCGCTGA
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| Protein sequence | MTALRNLGFG PGRAVVVLAF TQILCWGILI YPPVLTMPHL TADRGWSLTF GMAGFSLALV
ISGIMSPIVG GLIDRHGGNV VMAPGALAGA LGLALLATTD ARPMYFVSWA LIGLSMSSSL
YDPAFATLAR LFGSSARRQI TFVTFAGGFA STVGWPATHL LLEHVGWRGT YLVFAAVMAF
VVAPLHGFAL PRTPSPSHGA VVSGPHPVPE EPLRPEGRPF LLLAMAFALH ALILSGVTSN
LLSMFERGGL SAATVVTLGA LFGPAQVAAR LIDFLLAGRT HPLWIARGAI ALMALSFAVL
AFVGVSVPVA GLFCIAFGAA NGVMTIARGS LPLLMFGHAG YGRVIGRIAR PALFIQASAP
FVVAAAVERF SDAAVIEVGM LAALAGLGCF LLIRPPQPAS RR
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