| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1733 |
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| Symbol | |
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| ID | 3908258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1978443 |
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| End bp | 1980092 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883627 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_485352 |
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| Protein GI | 86748856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0167412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0176419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTGGC AAACCACACG TGGAACGGGA CGGATGACGC AGATCGAGGG CGAATTCGAC
TATATCGTGG TGGGCGCCGG CACTGCCGGC TGCATCGTCG CCAACCGGCT GTCGGCCGAT
CCGAATTGTC GGGTGCTGCT GCTGGAAGCC GGCGGCCGCG ACAACTGGAT CTGGTTTCAC
ATCCCGGTCG GCTATCTGTT CGCGATCGGC AATCCGCGCT CGGACTGGAT GTTCAGGACC
GAGCCGGAGC CCGGCCTCAA TGGTCGGTCA TTGGCCTATC CGCGCGGCAA GGTGATCGGC
GGCTCCTCGG CCATCAACGC GATGATCTCG ATGCGCGGCC AGGCCGCCGA TTACGACCAC
TGGCGCCAGC TCGGCCTGTC CGGTTGGGGC TGGGACGACG TTCGCCAGGT GTTCCGGCGG
CTGGAGGATC ACTTCCTCGG CGACAGCGAG CATCACGGTA AAGGCGGCGG CTGGCGGATC
GAGGCGGCGC GGCTGTCCTG GCCGATCCTC GACGCGGTGG CCGACGCCGC CGGCGAGATG
GGCATCCCGC GCAGCGCCGA TTTCAACACC GGCGACAACG AGGGCGTCGG CTATTTCCAC
GTCAACCAGA AGCGCGGCCG GCGCTGGTCG TCGGCGCGCG GTTTCCTCAA GCCGGCGCTG
CACCGGCCGA ATCTGAGGCT GGAAACCGGT GTCGTCACCG ACCGCGTGAT AGTCGAGAAC
GGCCGAGCCG TCGGCGTGCG GTTCCAGCAA GGCGGCGGCG TGGTCGAGGC GCGGGCGCGG
CGCGAGGTGG TGCTGTGCGC GGGATCGATC GGCTCGGTGC AAGTGCTGCA GCGTTCAGGC
ATCGGGCCGG CGGAATGGCT CACCCCGCTC GGCATCGATC CGGTGCTCGA TCGCCCGGGC
GTCGGCCGCA ATCTGCAGGA CCATCTGCAG CAGCGCGCGA TCTATCGCGT CAGCGGCGGC
CGCACCCTGA ACGAGATCTA TCACTCGCTG CCGCGGCGCG CCTGGATGGG CATGGACTAC
GCGCTGCGTC GGCGCGGCCC GCTGACGATG GCGCCATCGC AGCTCGGCAT CTTCACCCGC
TCCGATCCGC ATCAGGAGCG CGCCAACATC CAGTTTCACG TCCAGCCATT GTCTCTGGAT
AAATTCGGCG ACCCGCTGCA CCGCTTCCCG GCGATCACCG TCAGCGCCTG CAACCTGCGG
CCGACCTCGC GCGGCGAGAT CAAGCTGAAA TCCACCGCGC TCGACGCCGC CCCCTCGATT
GCGCCGCATT ATCTGACGAC CGCCGACGAC CGCCGCGTCG CCGCCGACGC GATCCGCTGT
ACGCGCCGGC TGATGCAACA GCAGGCGCTG GCGAAGTATC AACCCGAGGA GTATCTGCCC
GGCCGCGCGG TGGGCGACGA CGACGCCTCG TTGGCGAAAG CCGCCGGCGA CATCGGCACC
ACGATCTTCC ATCCGGTCGG CACCGCCAAG ATGGGCCTCG CCAGCGATCC GATGGCGGTG
GTCGACGAAC GCTTGCGCCT GCACGGCCTC GACGGCCTGC GCGTCGTCGA CGCCTCGGTG
ATGCCGACGA TCACCTCCGG CAACACCAAT ACGCCGACCG CGATGATCGC CGAGAAAGGC
GCGACGATGA TGCTGGAGGA TGGGAAGTAA
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| Protein sequence | MSWQTTRGTG RMTQIEGEFD YIVVGAGTAG CIVANRLSAD PNCRVLLLEA GGRDNWIWFH
IPVGYLFAIG NPRSDWMFRT EPEPGLNGRS LAYPRGKVIG GSSAINAMIS MRGQAADYDH
WRQLGLSGWG WDDVRQVFRR LEDHFLGDSE HHGKGGGWRI EAARLSWPIL DAVADAAGEM
GIPRSADFNT GDNEGVGYFH VNQKRGRRWS SARGFLKPAL HRPNLRLETG VVTDRVIVEN
GRAVGVRFQQ GGGVVEARAR REVVLCAGSI GSVQVLQRSG IGPAEWLTPL GIDPVLDRPG
VGRNLQDHLQ QRAIYRVSGG RTLNEIYHSL PRRAWMGMDY ALRRRGPLTM APSQLGIFTR
SDPHQERANI QFHVQPLSLD KFGDPLHRFP AITVSACNLR PTSRGEIKLK STALDAAPSI
APHYLTTADD RRVAADAIRC TRRLMQQQAL AKYQPEEYLP GRAVGDDDAS LAKAAGDIGT
TIFHPVGTAK MGLASDPMAV VDERLRLHGL DGLRVVDASV MPTITSGNTN TPTAMIAEKG
ATMMLEDGK
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