| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1727 |
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| Symbol | |
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| ID | 3908252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1969531 |
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| End bp | 1970271 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883621 |
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| Product | hypothetical protein |
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| Protein accession | YP_485346 |
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| Protein GI | 86748850 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR03468] hopanoid-associated phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.10129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.071068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTGG GGGCTAGGGG CGACGCGGCC GCGGAGCGAG ATCCGCGACC GGTTCTGATT
GTAACGGGGC TGATCCAGGA AGCGAAAATC GCCGAAGGGC CGGGTCTTAC GGTCATCTGC
AGCAGTAGCG ATCCGAAGCA GTTGCGCCGG ATGATGGCGA GCTTCGATGC GTCGTCGATT
CGCGGCGTGA TCAGCTTCGG CGTCGCCGGC GGGCTCGACC CGTCGCTGCG ATCCGGCGAC
ATCGTGATCG CGACCAACGT GACGGCGGGC GATCGCCGTT GGCAGTCCGA AACCGCCCTC
AGCGACGAAT TGCTGCGCAG CGCGGGTCTG CTCCGGCAGC GCGTGGTGCG TGGCGGCCTG
GTCGGCGTCG AGCAAGTGGT CGCGGCCCGT GCCGCGAAGG CGGCGCTGCA TTCGCAGACC
GGCGCGGCGG CCGTCGACAT GGAAAGCCAC ATCGCCGCCG ATTACGCCGC GGCAGCCAGG
CTGCCGTTCG CGGCGCTGCG CGTGATCAGC GATCCGGCCA GCCGCAGCCT TCCGCAGATG
GTGTCGACCG CGATCAAGCC GAACGGCGAT GTCGATCTGC GCAGAGTTCT GCGTGGACTG
GCGCGTCACC CGACGTCGAT CCGGTCGCTG GTCTCGACCG GAATCGATTT CAATCGGGCG
CTCCGCAGCC TACGCGGCTG TCGAAGCTTC GTGCTTGACG CCGTGATTGG CGGCGGTGGT
GGTGTGGTCG CCGAGGCTTG A
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| Protein sequence | MILGARGDAA AERDPRPVLI VTGLIQEAKI AEGPGLTVIC SSSDPKQLRR MMASFDASSI
RGVISFGVAG GLDPSLRSGD IVIATNVTAG DRRWQSETAL SDELLRSAGL LRQRVVRGGL
VGVEQVVAAR AAKAALHSQT GAAAVDMESH IAADYAAAAR LPFAALRVIS DPASRSLPQM
VSTAIKPNGD VDLRRVLRGL ARHPTSIRSL VSTGIDFNRA LRSLRGCRSF VLDAVIGGGG
GVVAEA
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