Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1660 |
Symbol | |
ID | 3908647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1888944 |
End bp | 1889648 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637883554 |
Product | ABC transporter related |
Protein accession | YP_485279 |
Protein GI | 86748783 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG AAGTCTCTGA GCTGAACAGT TTCTACGGGC CCGCCCACAT CCTGTTCGAC GTCGGCTTCG CGGTCGGCGA GGGCGAGGTC GTCGCCATGC TCGGGCGCAA CGGCGCCGGC AAGAGCACGA CCTTCCGATC AGTGGTGGGG CTGGTGTCCC GTCGTGAGGG AAAAGTGACG TTCGAAGGTG AGGACGTCTC GCGGCTGCCG TCCTACGAGA TCGTGCGGCG CGGGCTCGGC TATGTGCCGG AAGACCGGCG GATCTTCACC GAACTGAGCG TCGAGGAGAA TTTCGAAGTC GGCCGCCAGA AAGCCCGCCC CGGCGTCGCC GCCTGGACGC CGGAGCGGAT CTACACGCTG TTTCCCAATC TCGGCGAAAT GCGCAAGCGG CTCGGCGGCG ACATGAGCGG CGGCGAACAG CAGATGCTCA GTATCGGCCG CACGCTGATG GGAAACCCCT CGCTCGTGCT GCTGGACGAA CCCTCCGAAG GGCTCGCGCC CAAGATCGTC GAGCAGATGG CCGACGCCAT TCTGGCGATG AAGCGCGAAG GGCTCAGCAT CGTCATTTCC GAGCAGAATC TGCATTTTGC CAAGCTGATC TGCGATCGCG CCTATATTAT CGAGAAGGGA CGAATTCGAT TCTCCGGCAC CATCGACGAA CTCGAGGCGC ACCCCGAAAT CCGGGATGCT TATCTCGCGG TGTGA
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Protein sequence | MKLEVSELNS FYGPAHILFD VGFAVGEGEV VAMLGRNGAG KSTTFRSVVG LVSRREGKVT FEGEDVSRLP SYEIVRRGLG YVPEDRRIFT ELSVEENFEV GRQKARPGVA AWTPERIYTL FPNLGEMRKR LGGDMSGGEQ QMLSIGRTLM GNPSLVLLDE PSEGLAPKIV EQMADAILAM KREGLSIVIS EQNLHFAKLI CDRAYIIEKG RIRFSGTIDE LEAHPEIRDA YLAV
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