Gene RPB_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1337 
Symbol 
ID3907845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1521822 
End bp1522499 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID637883231 
Producthypothetical protein 
Protein accessionYP_484958 
Protein GI86748462 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTCGA AGACGGCGAA CCGGGGCTCG GCGAGGCGCG CGATGTCGGT GTGGCGGATG 
TGGAGCGACT TTCTCACCGG CGGCGCGCCT GCCGGTCCCG GCGGCGCCGA GCTCGACGCG
CGCTACGGCA TCGAGACCGG TGCCAGTGTC GAGCTCGACC AGCTCACCAT CCGGTCGGAC
AGCCGCCGCT TCGGCGAGCC CTACCAGGCC AGCGATCCGC GCGTGCTGGC CGATTCGCTG
AAATATCTCG GGCTCGATCC GCGCGGCCGC GGCTTCGTCG ATCTCGGCTG CGGCAAGGGC
CGGATGCTGA TCGCCGCGGC CGAGCTCGGC TTCGCCTCCT GCACCGGCGT CGAATTCGCC
GCCGAGCTGG CGCGCGCGGC GCAGCGCAAC GCCGCCGCCT CCGGCTTCCG CCAGATCCGC
ATCGTCCACG GCGACGCCGG CGCTTACGCG TTTCCGGACG CGCCGTTCGT GCTCTACATG
TTCAACCCGT TCTCGGCCGA GATCATGGCG CGGGTCCGCG ACAATCTCTC GAGGCTGCGC
CGCCCGGACT ACGCGATCAT CTACAAGAAC GCCCGCGAGC GGCACCTGTT CGACGCGATG
CCGGCGCTGC ACCACAAAGG CTCCCCGCCC CGCCACGGCG GCCTGTGGGC CACGCATCTC
TGGGTGACGC AGCGGTGA
 
Protein sequence
MASKTANRGS ARRAMSVWRM WSDFLTGGAP AGPGGAELDA RYGIETGASV ELDQLTIRSD 
SRRFGEPYQA SDPRVLADSL KYLGLDPRGR GFVDLGCGKG RMLIAAAELG FASCTGVEFA
AELARAAQRN AAASGFRQIR IVHGDAGAYA FPDAPFVLYM FNPFSAEIMA RVRDNLSRLR
RPDYAIIYKN ARERHLFDAM PALHHKGSPP RHGGLWATHL WVTQR