Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1065 |
Symbol | |
ID | 3908917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1220466 |
End bp | 1221449 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882958 |
Product | hypothetical protein |
Protein accession | YP_484686 |
Protein GI | 86748190 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5459] Predicted rRNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.350622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGC CGTCCCTCCC CGCCGAACTG AAGGCCGCGC TGGAGCAGGC GCTGCACCGC TTGCCGCGCG ACGCGGCGGC GACGCGGGCG GCTGCTATCT CACAGACCTA TCGCGACGGC GGCAACTCTT CCCCGATCAA GACCACGACC GACGCGCTGG CCTATGCGGG CGCGCGGATG CCGGCGACTT ACGCGGCGGT GGCGGCGAGC CTGAATGCGC TGCGCGAGAT CCGCCCGGAC TTCGCCCCGC GCACGCTGCT CGATGTCGGC GCCGGACCGG GCACCGCGAG CTGGGCCGCC GCGCAGGCGT TCGACACGCT GCAGAGCTTC ACCCTGCTCG ATGCCAACAC GGCGTTACGC GCATTGGCGC TGACGCTGGC GCAAGGCAGC CCGCTCGCGG GTGCGGACTA CCAACTCGGC GACGCGCGCA AACTGCTCGG CGGGGCGCCG GACGCGGCCT TGGTGATCGC CAGCTACGTC ATCAACGAAC TCGACGACAA AGCGCGCGAC GACTTCGCCG ATGCGGCGTG GCGCAAGACC AGCGACACGC TGCTGATCGT CGAGCCCGGC ACGCCGGCCG GCTATGCCCG CATCCTCGCG GTCCGCGCGC GGCTGATCGC ACAGGGCGCG CGCGTGATCG CGCCGTGCCC GCACGAGCAC GCCTGTCCGC TGACCGCGCC GGACTGGTGT CACTTCGTGC AGCGGCTACC GCGGTCGAGA CTGCATCAAC ACCTCAAGGG CGCCGAACTT CCCTATGAGG ACGAAAAATT CATCTATCTG GCGCTGAGCC GCACGGCGCC GCCGTCGCGG CCCTCGCGCG TGCTGACGCA GCCGGTGCAG ACCAAGGTGG CGATCACCGC CAAGCTGTGC ACGCCGCAGG GGCTCGACCA TGCGGTCGCG CCGCGGCGTG ACAAGCCGTC TTATGCGCGA TTCCGCCGCC TGAGTTGGGG CGACACGATC AGCACCGACA CCGCACGGGA ATAA
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Protein sequence | MIPPSLPAEL KAALEQALHR LPRDAAATRA AAISQTYRDG GNSSPIKTTT DALAYAGARM PATYAAVAAS LNALREIRPD FAPRTLLDVG AGPGTASWAA AQAFDTLQSF TLLDANTALR ALALTLAQGS PLAGADYQLG DARKLLGGAP DAALVIASYV INELDDKARD DFADAAWRKT SDTLLIVEPG TPAGYARILA VRARLIAQGA RVIAPCPHEH ACPLTAPDWC HFVQRLPRSR LHQHLKGAEL PYEDEKFIYL ALSRTAPPSR PSRVLTQPVQ TKVAITAKLC TPQGLDHAVA PRRDKPSYAR FRRLSWGDTI STDTARE
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