| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0861 |
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| Symbol | |
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| ID | 3909119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 985642 |
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| End bp | 987384 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882754 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_484483 |
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| Protein GI | 86747987 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTTTT CGGTCAGATT GCTGGGGCCA TTCCAGCTGT CGACGCCGGA CGGTCGACGC
GTCGAGATTT CCAGCAAGAA GGGGACGGCC GTCATCGCCA TGCTGGCGAT GTCGCGCGAC
GGTGAGCACA CCCGTGGCTG GCTGCAGGAT CGACTGTGGG GCAGTCGCGG CCATGCCGAA
GCGGCGGGAA GTCTGCGCCG CGAATTGTCG AATCTGCGAA AGCTTCTGAA TGGCGCCGGC
ATCGAATTGC TGGTCAGCGA TCGTGACCGC GTCCGCCTGC GGCTCGACCG GATCGTCGTC
GACGCCCGCG ATCCGAGCGC CGATCCGGCC ATCGCCGGCG AATTTCTCGA AGGCTTCGAT
ATTCCCGGCG AGGCCAGCTT CCGCGATTGG CTGCGCGAGC AGCGCGCGCG GCTGATGCGC
GGACCGCGCC CACCGGCGCC CGCCGCGCCG GTGCCGGGCG GGCTGCCCAG CCACATCCTC
GACACCAGCC AGCCGCCCGT CGGCTTCACC GGCAATCAGG CGATCGCGGT GCTGCCGTTC
ACCAACGTCA CCGGCGACGA GACGCTGGAC TATCTGGCCG AGGGCATCAG CGAAGAGCTG
ATCGTCGGCC TGTCGCGGAT TCGCTGGCTG CCGGTGATCG CGCGCAGTTC GAGCTTTTCC
TTCGCCGACA CGATCGACCG CAAGGTGATA GGCCAGCGGC TCGGCGCGCA TTATCTGATC
GAGGGGCATC TGTATCGCGC CTACGATTCG TTCGGAGTCT CCGCCAGCCT GTCGGAGGCG
GCGACCGGCT ACGCGATCTG GTCGCGGCGT TTCACGCTGC AATCGCCGGC GCTCCGCGAC
GAACTCGAGC AGTTCGTCAA CGAACTGGTG GCGCAGCTCG AGATCAGGAT CGAGCACGCC
GAGCAGATCC GCATCCGCAA CAAGCGCCAG GACGCGCTCG GCGTCAGCGA CCTGATCTGG
CGCGGCCGCT GGCACCTCAA CCGGCTGACC CGCGCCGATT CCGACATGGC GCAGAAGCTG
TTCGCCGACG CGTTGGCGCT CGATCCGGAC TCGGCGGAGG CGCTGATCCA GGTCACCTCG
GCGCTCGGCT GGTCGATCTG GGCCGGCCGC CAGCCGCAGG AGCAGATCCT GCGGATGCGC
AAGCTGGCGA AGCAGGCCAG TCTCGCCGAC CCCGACGACG GCCGCGGCTT CATGCTCGCC
GGCATCGCCG AGATGTGGCT GCGCCATCCG CACGAGGCCA AGACCCTGCT GCAGCACGCG
ATCGCGCTCA ATCCGAGCCT CGCGCTGGCG CACGCCCAGC TCGGCGGCTG CTACAATCTC
GCCGGCGAGC CGGCCAAAGC GATCGATCAC CTCAAGGCGT CGCTGCGGCT GAGCTCGAAC
GATCCGAACA TCTTCTATGC GCTGGGCGAA CTGGCGATGT CGCACACCAT GTGCGGCCGC
TGGGCCGACG CGGCCGAGCA CGCCTCGCTG TCGCTGGCCC GCCGCCCGGC CTATTGGTAC
GCGCACGTTC TCAAGATCAA CGCGCTGGCG CGCGGCGGTC ATCTCGCCGC GGCGCGGCTC
GCGACCGATG AATTACTTGC TGTCAAGCCG AATTTTTCGC GGCGTTACAT CGAATGGTTG
CCGTTCGTCG ATAGAACATG GATTGACCAT TTCGTCGAAG GCCTGAAAAT GGTGCCGGGC
CGCGACGCGG ACTGGCTGGA GCGCGACAGT CAAGAAAGCC CCGCGCATTT TGAGCCGAAT
TGA
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| Protein sequence | MRFSVRLLGP FQLSTPDGRR VEISSKKGTA VIAMLAMSRD GEHTRGWLQD RLWGSRGHAE
AAGSLRRELS NLRKLLNGAG IELLVSDRDR VRLRLDRIVV DARDPSADPA IAGEFLEGFD
IPGEASFRDW LREQRARLMR GPRPPAPAAP VPGGLPSHIL DTSQPPVGFT GNQAIAVLPF
TNVTGDETLD YLAEGISEEL IVGLSRIRWL PVIARSSSFS FADTIDRKVI GQRLGAHYLI
EGHLYRAYDS FGVSASLSEA ATGYAIWSRR FTLQSPALRD ELEQFVNELV AQLEIRIEHA
EQIRIRNKRQ DALGVSDLIW RGRWHLNRLT RADSDMAQKL FADALALDPD SAEALIQVTS
ALGWSIWAGR QPQEQILRMR KLAKQASLAD PDDGRGFMLA GIAEMWLRHP HEAKTLLQHA
IALNPSLALA HAQLGGCYNL AGEPAKAIDH LKASLRLSSN DPNIFYALGE LAMSHTMCGR
WADAAEHASL SLARRPAYWY AHVLKINALA RGGHLAAARL ATDELLAVKP NFSRRYIEWL
PFVDRTWIDH FVEGLKMVPG RDADWLERDS QESPAHFEPN
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