Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0501 |
Symbol | |
ID | 3909405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 559355 |
End bp | 559861 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637882389 |
Product | MarR family transcriptional regulator |
Protein accession | YP_484123 |
Protein GI | 86747627 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0851191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.700871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC ATATCAAAGA TCCAATTGCC GGCGCGGCCG GACCGGAGCG CGATCTGACG CGTCGGTTCG CCTCGATCAC CACCAATGTC GCCGTCTTTC TGGACGAGAT CCGCCATTAT CGCGCCAAGA ACCTCGGGAT CAGCGGCCCG CAATTCGCGA TTCTGATGGC GGTGATGGAT CTCGACGAGG GCGAGGGCGT ATCGGTGCGG CACGTCGCCA AGGCGATGCA CGTCGATTCG TCGTTCATTA CCACCCAGTC CAAGCTCCTG GAGAAGAAGG CGCTGGTGCG CCGCAGGCCG GATCCGACCG ACGCCAGGGT GGTGAAGCTG TCTCTCTCCG ACAAGGCCTA CAAGTCGATC GCGAGCTTCG CCGCCGAGGA GCAGTCTCTG AACGACTTCA TCTTCGAAGG TTTGTCGAAT GAATCGCTGG AGGATCTGGT CCAGCAGCTC ACGGCGCTGA AATTGCGTCT CGAAAAGGCG TGCCTGAAGA TCGCCGGCGG CTTCTAG
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Protein sequence | MKKHIKDPIA GAAGPERDLT RRFASITTNV AVFLDEIRHY RAKNLGISGP QFAILMAVMD LDEGEGVSVR HVAKAMHVDS SFITTQSKLL EKKALVRRRP DPTDARVVKL SLSDKAYKSI ASFAAEEQSL NDFIFEGLSN ESLEDLVQQL TALKLRLEKA CLKIAGGF
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