Gene RPB_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0501 
Symbol 
ID3909405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp559355 
End bp559861 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID637882389 
ProductMarR family transcriptional regulator 
Protein accessionYP_484123 
Protein GI86747627 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0851191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.700871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC ATATCAAAGA TCCAATTGCC GGCGCGGCCG GACCGGAGCG CGATCTGACG 
CGTCGGTTCG CCTCGATCAC CACCAATGTC GCCGTCTTTC TGGACGAGAT CCGCCATTAT
CGCGCCAAGA ACCTCGGGAT CAGCGGCCCG CAATTCGCGA TTCTGATGGC GGTGATGGAT
CTCGACGAGG GCGAGGGCGT ATCGGTGCGG CACGTCGCCA AGGCGATGCA CGTCGATTCG
TCGTTCATTA CCACCCAGTC CAAGCTCCTG GAGAAGAAGG CGCTGGTGCG CCGCAGGCCG
GATCCGACCG ACGCCAGGGT GGTGAAGCTG TCTCTCTCCG ACAAGGCCTA CAAGTCGATC
GCGAGCTTCG CCGCCGAGGA GCAGTCTCTG AACGACTTCA TCTTCGAAGG TTTGTCGAAT
GAATCGCTGG AGGATCTGGT CCAGCAGCTC ACGGCGCTGA AATTGCGTCT CGAAAAGGCG
TGCCTGAAGA TCGCCGGCGG CTTCTAG
 
Protein sequence
MKKHIKDPIA GAAGPERDLT RRFASITTNV AVFLDEIRHY RAKNLGISGP QFAILMAVMD 
LDEGEGVSVR HVAKAMHVDS SFITTQSKLL EKKALVRRRP DPTDARVVKL SLSDKAYKSI
ASFAAEEQSL NDFIFEGLSN ESLEDLVQQL TALKLRLEKA CLKIAGGF