Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0321 |
Symbol | |
ID | 3908702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 365653 |
End bp | 367608 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637882207 |
Product | OmpA/MotB |
Protein accession | YP_483943 |
Protein GI | 86747447 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.210637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA TTCAGCTCGC CTTACTCGCC TCGACAGCGA TCGTCGTGTG GCAGTCCACC ACGCTCCCGG CGCATGCCGA TGCGACGTCG GTGATCGCGA CGCCGATGCT GATGGCGCAA GCCGCACCAA CCGACAAGGG CGACGAGAAG AAGGGCCCGC CCGCGGGCGA GCGCAAGGGT CCGCCGCCGG GCGCAGCGCC CGGTGCCGCT CCGCCGCCGC GTCCTGCTGC TCCGCCGGCC CCTCCCGCCG GCCGCATCGG CGAACCGCCG GCCGCGCCGC GCGCCGAACC GCCGCCGCGT CCCGCTGCTC CGCCGCCTCC GCCGCCGCCG CGGGCTGAAC CGCCGGCTGC ACCGCGCGCA GCGCCGCCGC CCCCTCCGCC TGCTGCCGCG ACACCACCGC GTCCGCCATC GCCGCCGGCC GAGAAGAGCG CGCCGCGGGC CGAGCCGCCG GCCGCTCCGC GTGTTGCGCC GCCGCCCCCG CCGCCTCCGG CTGCTGCTCC GCAGCGACAA TCCGCGCCGC CGCCTGCCGA GAAAGCTGCT CCGCCCCCGC CCCGTCCGGC GCCGCCGGCT GCGGGTCAGA TCGGCGCGCC GCCGGCGGGC CAGACCCCGC CTGCCGCAGT GCAGAAGGGC GCCCCGCCGC CTCCCGCACA GCCGTCCGCC GCCCCGCCGC CGGCCGTGCA GAGAGAGCGA GCAGCTCCGC CGCCCGCTGC GGCGCCTGAC GCCGGCCGGA TCGGCGCGCC GCCTGCGGTG ACGCAGACGC CGCCTCCGCC GCCGACCACG CAACAGCGCG ACGCCCCGCC GCCCGCCACG GCTCCGGCCG AACGGGGCAC CGTGGCACCT CCGCCTCCGC CGCCTGCTGC AGGAACGATG GGTCCGCAGG GCGCCCAGCC CGCTGCGCCG GGCTCCCTGC CGGCTGGTGC GCCGGTCGCC CGCACGCCGC CACCGACGGT GACAACGCCG ATCCCGGCTG CCCCGCCGCC GCCGCAGGCG CTCGCGCCGA TCGCCCCGGG CGCCGTCGCG CCGGGTCCCC GCAACATGAG TGACTTCCGC GGCGAACGCC GCGAGGTCCG TGAGGGTGGC CGCATCGTGA TCACCGAGCC GGGCCGGATC ATCGTGCGCG ATCCGGGCGG CCGGGAATTC ATCCGCCACA ACGAGATGGA TCGCTTCCGC TACGGCGCCC GCGACATTCG CACCGAGGAC GTCCGCGGCG GCGGCACCCG GACCGTCGTG GTGCGGCCCG ACGGCACCGA GATCATCAAC GTCATCGGCG GCGACGGTCA GTTGCTGCGG CGGATCCGCC GCGACCGCGA CGGCCGCGAG ATCGTCATCA TCGACAACTC GTTCGGTCCG CGCGACCGGG CGAGCTTCTA TGTCGACCTG CCGCCGCCGG TGCTGCGGAT TCCGCGCGAC CGCTACATCG TCGACTACGA GGACGCCTCG CCGGAGCTGA TCTACGACAC GCTCGAAGCG CCGCCGGTGG AGCGGATCGA ACGCCGCTAC TCGATGGACG AGATCCGCTA CAGCCCGTCG GTGCGGCAGC GGATGCCCTC GATCGATCTC AACACCATCA CCTTCGAGAC CGGATCCTGG GATATTCCGC CGGATCAGGC CGCCAAGCTG CAGGTGATCG CCGATGGCCT CAACCGGGCG ATCCAGCGCA ATCCGCGCGA GGTGTTCCTG ATCGAGGGCC ACACCGACGC GGTCGGCAAC GACACCGACA ATCTGTCGCT GTCCGATCGC CGCGCCGAGT CGGCCGCCAC GCTGCTCACC CAGCAGTTCG GGGTGCCGGC GGAGAACCTG ACCTCGCAGG GCTATGGTGA GCAGTACCTG AAAGTGCCGA CCGATGGACC GGAGCGGCAG AACCGCCGCG TCACCGTCCG GCGCATCACG CCGCTGCTGA ACGGCGGCCA GGCCGCGCTG CCGCCGCCCC CGCCCGGCAC CGCGCCGCCG CGCTGA
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Protein sequence | MKRIQLALLA STAIVVWQST TLPAHADATS VIATPMLMAQ AAPTDKGDEK KGPPAGERKG PPPGAAPGAA PPPRPAAPPA PPAGRIGEPP AAPRAEPPPR PAAPPPPPPP RAEPPAAPRA APPPPPPAAA TPPRPPSPPA EKSAPRAEPP AAPRVAPPPP PPPAAAPQRQ SAPPPAEKAA PPPPRPAPPA AGQIGAPPAG QTPPAAVQKG APPPPAQPSA APPPAVQRER AAPPPAAAPD AGRIGAPPAV TQTPPPPPTT QQRDAPPPAT APAERGTVAP PPPPPAAGTM GPQGAQPAAP GSLPAGAPVA RTPPPTVTTP IPAAPPPPQA LAPIAPGAVA PGPRNMSDFR GERREVREGG RIVITEPGRI IVRDPGGREF IRHNEMDRFR YGARDIRTED VRGGGTRTVV VRPDGTEIIN VIGGDGQLLR RIRRDRDGRE IVIIDNSFGP RDRASFYVDL PPPVLRIPRD RYIVDYEDAS PELIYDTLEA PPVERIERRY SMDEIRYSPS VRQRMPSIDL NTITFETGSW DIPPDQAAKL QVIADGLNRA IQRNPREVFL IEGHTDAVGN DTDNLSLSDR RAESAATLLT QQFGVPAENL TSQGYGEQYL KVPTDGPERQ NRRVTVRRIT PLLNGGQAAL PPPPPGTAPP R
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