Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4869 |
Symbol | |
ID | 3370419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5780152 |
End bp | 5780826 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655236 |
Product | regulatory protein, TetR |
Protein accession | YP_237934 |
Protein GI | 66048093 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCAG CCCAACCAAG AGCCACGCCC ATGACACGCG CCGCCACTCC TCGCAAACCT CAAGCACGCA GCCAGGCCAG AATCGATTCG ATTCTCGACG CCGCCCGCAC GCTGCTTGCC GAACAAGGAG TGGCCAGCCT GTCGATTTAC AGCGTTGCCG AGCGCGCCGG CATTCCGCCC TCGTCGGTGT ACCACTTCTT CGCCAGCGTC CCCGCGCTGC TTGAAGCACT GACCGCCGAC ATCCACGCCG CCTTTCGCGC CTCGCTGCAG GCACCCATCG ATCACGACCA GCTCACCACC TGGCGCGATC TGTCACGCAT CGTCGAGCTG CGCATGCTGG CCATCTACAA CGCCGACGCC GCCGCCCGCC AATTGATCCT CGCCCAGCAC GGCCTGACCG AAATCAACCA GGCCGACCGA CAGCACGACA TTGAACTGGG GCACTTGATG CTTGAAGTGT TTGACCGCCA CTTCCAGCTG CCCGCGTTAC CGGACGATGT AGACGTATTT GCGCTGGCCA TGGAACTGGG GGATCGGGTG TATGCGCGGT CGGTGCAGTT GCATGACGAG ATCACACCGC GCATGGCTGA GGAAGGGATG CGGGTGTTTG ATGCGTATTT GGGGTTGTAT TTGCCGGTGT TTTTGGTGAA GAGAAAAATA TCACCACTGC AGTGA
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Protein sequence | MPAAQPRATP MTRAATPRKP QARSQARIDS ILDAARTLLA EQGVASLSIY SVAERAGIPP SSVYHFFASV PALLEALTAD IHAAFRASLQ APIDHDQLTT WRDLSRIVEL RMLAIYNADA AARQLILAQH GLTEINQADR QHDIELGHLM LEVFDRHFQL PALPDDVDVF ALAMELGDRV YARSVQLHDE ITPRMAEEGM RVFDAYLGLY LPVFLVKRKI SPLQ
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