Gene Psyr_4669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4669 
Symbol 
ID3370219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5534830 
End bp5537118 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content63% 
IMG OID637655036 
Productinsulinase-like:peptidase M16, C-terminal 
Protein accessionYP_237734 
Protein GI66047893 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like 
TIGRFAM ID[TIGR02110] coenzyme PQQ biosynthesis probable peptidase PqqF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG CACACTCCGC CGACACTCAA CGCCTCACGC TGGCCAACGG CCTGAATGTG 
GTGCTGTGTC ATGAGCCACG GCTCAAGCGC TGTGCGGCCT CGTTGCGCGT GGCAGCCGGC
AGTCACGATG CGCCGCAGGC GTGGCCAGGG CTGGCGCATT TTCTGGAGCA CCTGTTTTTT
CTCGGCACCG AACGCTTCCC GGCCGGGGAC AACCTGATGA CCTTCGTGCA GCGTCATGGC
GGGCAGGTCA ATGCCAGCAC CCGCGAGCGC ACCACCGACT TCTTCTTCGA ACTGCCGCAG
GCGGCCTTCG CCCAAGGGCT GCAGCGATTG TGCGACATGC TTGCCCGGCC GCGCATGGAC
ATCGCAGATC AATTGCGCGA ACGCGAAGTG TTGCACGCCG AGTTCATCGC CTGGCTCGGC
GATAGCGAAT CCCGCGATCA GGCACGCCTG CTGACAGCGA TCAACCCTGA GCATCCGCTG
CGTGGCTTTC ACGCCGGCAA TCGCTACAGC CTGTCAGTGC CTAACCCGGC GTTTCAGCAG
GCATTGCATG ACTTTTATCG AGGCTTCTAT CAGGCCGGGC AGATGACGCT GTGCCTGACT
GGCCCGCTGC CGATGGCTGA ACTGCAGGCG CTGGCGACAA ACCACGGCGC GGTTTTCGCC
ACTGGGATAA AGGTCACACA GCGCCCGCCT CCAGCATTGA TGACCAGCCC TCGACAGGCT
GGCGAGCAAA ACCATCTGCT GTTTGCCTTC GAGGACTTGC CGGACAAGGC TGACGAAGCG
GTGGCCTTCT TCTGTCACTG GCTGAACGCA GCGCAGCCTG GCGGGCTGGT TGCCGAGCTG
ATCCGCAGGG GCCTTTGCAC TTCACTGCAC GCCGCGCCGC TTTACCAGTT CGGCGGGCAG
CTTTTGCTGG ATATCGAGTT TAAGGGCGAA CCGGCGAACG CGACCGCTAT CAGCAGCCTG
CTTTTCAGCT GGCTCGGTTT CTTCGAGGCT CACTGGCCGA CGCGAATTGG GGAATACCAC
CGTCTCGAAC AACGCCGTCT GCAGATGTGC GGAGCATTGG CTCTGGCCAA CCATCACTGT
CGCGAAACGC CCGCGCAGCT GAGCGAGCAA GGCCAAAAAG CCTTAAGCGC ATTTCTCGCA
AAACTCACGG CTGATGTGGA TAACCTCGAT CCAGAGCCGG TCGACTGGCG CCTGCCAGCC
CCGAACCCAT TTCTTGGTAC GGCGGCGGAC GACCCCGCTG AAGCCGCGCT GTACCTGCGC
TGGCAACTGC CGTCCCCACA GCCCGCCTTT TGGCGGATGC TCGACGCCGC GCTCAAACCA
CTGGCCGAAG ACGCACGTCA GGCCGGGGTA ACACTGACCT TCACCGCGTA CGGCCCCTAC
TGGCAGCTAC AGTTGAACGG TTTGCGCGAA CCCATTGTGG CAGTCCTGCA ACAGAGCCTG
CTGCGCTTGC AGCACCCCGA TGCCCGCGCG CAGGAACACG ACGAGCCAGT GTTGATCCCG
ATTCGTCAGT TGCTCAAGCA GCTTGCCGAT CACTTCCTGC GCAGTAACCC GGAGGTGAGC
ATAAGCGACC TGCCAAGCGT ATGGGCGGCT TCGCGCTGGA TCAGTTTCAC CAGCGGTTTC
GGCCCGGCCA GCCAGTCAAT GCTGGACGCG GTGTTGAATG CAGCACCCGG CGTTCGGCAA
ACTTCCCCGG CCGATCTGCC AACCATTCGC GCTGGCAAGC ACTGGGCAGC GCAAGCATCG
TCTTCCTCGG AAGACGCCGT GCTGGTGTTC TGCCCGGCGC CCACGACTTC CATCGAAGAT
GAAGCCGCCT GGCGTTTGCT CGCGCACCTG GCCCAGCCGC CGTTCTATCA GCGGCTGCGG
GTCGAGCTGC AATTGGGTTA CGCGGTGTTC AGTGGCCTCA GGCAGATCGA CGGAAAGACC
GGCTTGCTGT TCGGTGTGCA ATCGCCCACC TGCAATGCCC AGCAACTGTT TGAGCACATC
GCGGCCTTTA TCGGCAGATT GCCGCAGTTA GTCCGCGACG CAGATTTGCC TGAACAGACA
AACGCCCTTG CAGCGCAGTT CGAGCCGTCG AACCTGCCGG AGCAACAGCG TGCCGACCTG
CAGTGGCAGG CACACCTTGC CGGGCATCAG AGCGACCATG CGCCCACCTT GCAGCGGGCG
CTGTCAAATC TGGAAACACA CTCGTTGCTG GCCTCTGCGG ATCAATTGAT CAAGGCCACA
GGTGGCTGGC TGATCGTGGC CAATCGCCCT GCCAGCGCGG CCGTTCCGCA ATCCTTACCT
GAACAGTAA
 
Protein sequence
MPAAHSADTQ RLTLANGLNV VLCHEPRLKR CAASLRVAAG SHDAPQAWPG LAHFLEHLFF 
LGTERFPAGD NLMTFVQRHG GQVNASTRER TTDFFFELPQ AAFAQGLQRL CDMLARPRMD
IADQLREREV LHAEFIAWLG DSESRDQARL LTAINPEHPL RGFHAGNRYS LSVPNPAFQQ
ALHDFYRGFY QAGQMTLCLT GPLPMAELQA LATNHGAVFA TGIKVTQRPP PALMTSPRQA
GEQNHLLFAF EDLPDKADEA VAFFCHWLNA AQPGGLVAEL IRRGLCTSLH AAPLYQFGGQ
LLLDIEFKGE PANATAISSL LFSWLGFFEA HWPTRIGEYH RLEQRRLQMC GALALANHHC
RETPAQLSEQ GQKALSAFLA KLTADVDNLD PEPVDWRLPA PNPFLGTAAD DPAEAALYLR
WQLPSPQPAF WRMLDAALKP LAEDARQAGV TLTFTAYGPY WQLQLNGLRE PIVAVLQQSL
LRLQHPDARA QEHDEPVLIP IRQLLKQLAD HFLRSNPEVS ISDLPSVWAA SRWISFTSGF
GPASQSMLDA VLNAAPGVRQ TSPADLPTIR AGKHWAAQAS SSSEDAVLVF CPAPTTSIED
EAAWRLLAHL AQPPFYQRLR VELQLGYAVF SGLRQIDGKT GLLFGVQSPT CNAQQLFEHI
AAFIGRLPQL VRDADLPEQT NALAAQFEPS NLPEQQRADL QWQAHLAGHQ SDHAPTLQRA
LSNLETHSLL ASADQLIKAT GGWLIVANRP ASAAVPQSLP EQ