Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4669 |
Symbol | |
ID | 3370219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5534830 |
End bp | 5537118 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655036 |
Product | insulinase-like:peptidase M16, C-terminal |
Protein accession | YP_237734 |
Protein GI | 66047893 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
TIGRFAM ID | [TIGR02110] coenzyme PQQ biosynthesis probable peptidase PqqF |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCG CACACTCCGC CGACACTCAA CGCCTCACGC TGGCCAACGG CCTGAATGTG GTGCTGTGTC ATGAGCCACG GCTCAAGCGC TGTGCGGCCT CGTTGCGCGT GGCAGCCGGC AGTCACGATG CGCCGCAGGC GTGGCCAGGG CTGGCGCATT TTCTGGAGCA CCTGTTTTTT CTCGGCACCG AACGCTTCCC GGCCGGGGAC AACCTGATGA CCTTCGTGCA GCGTCATGGC GGGCAGGTCA ATGCCAGCAC CCGCGAGCGC ACCACCGACT TCTTCTTCGA ACTGCCGCAG GCGGCCTTCG CCCAAGGGCT GCAGCGATTG TGCGACATGC TTGCCCGGCC GCGCATGGAC ATCGCAGATC AATTGCGCGA ACGCGAAGTG TTGCACGCCG AGTTCATCGC CTGGCTCGGC GATAGCGAAT CCCGCGATCA GGCACGCCTG CTGACAGCGA TCAACCCTGA GCATCCGCTG CGTGGCTTTC ACGCCGGCAA TCGCTACAGC CTGTCAGTGC CTAACCCGGC GTTTCAGCAG GCATTGCATG ACTTTTATCG AGGCTTCTAT CAGGCCGGGC AGATGACGCT GTGCCTGACT GGCCCGCTGC CGATGGCTGA ACTGCAGGCG CTGGCGACAA ACCACGGCGC GGTTTTCGCC ACTGGGATAA AGGTCACACA GCGCCCGCCT CCAGCATTGA TGACCAGCCC TCGACAGGCT GGCGAGCAAA ACCATCTGCT GTTTGCCTTC GAGGACTTGC CGGACAAGGC TGACGAAGCG GTGGCCTTCT TCTGTCACTG GCTGAACGCA GCGCAGCCTG GCGGGCTGGT TGCCGAGCTG ATCCGCAGGG GCCTTTGCAC TTCACTGCAC GCCGCGCCGC TTTACCAGTT CGGCGGGCAG CTTTTGCTGG ATATCGAGTT TAAGGGCGAA CCGGCGAACG CGACCGCTAT CAGCAGCCTG CTTTTCAGCT GGCTCGGTTT CTTCGAGGCT CACTGGCCGA CGCGAATTGG GGAATACCAC CGTCTCGAAC AACGCCGTCT GCAGATGTGC GGAGCATTGG CTCTGGCCAA CCATCACTGT CGCGAAACGC CCGCGCAGCT GAGCGAGCAA GGCCAAAAAG CCTTAAGCGC ATTTCTCGCA AAACTCACGG CTGATGTGGA TAACCTCGAT CCAGAGCCGG TCGACTGGCG CCTGCCAGCC CCGAACCCAT TTCTTGGTAC GGCGGCGGAC GACCCCGCTG AAGCCGCGCT GTACCTGCGC TGGCAACTGC CGTCCCCACA GCCCGCCTTT TGGCGGATGC TCGACGCCGC GCTCAAACCA CTGGCCGAAG ACGCACGTCA GGCCGGGGTA ACACTGACCT TCACCGCGTA CGGCCCCTAC TGGCAGCTAC AGTTGAACGG TTTGCGCGAA CCCATTGTGG CAGTCCTGCA ACAGAGCCTG CTGCGCTTGC AGCACCCCGA TGCCCGCGCG CAGGAACACG ACGAGCCAGT GTTGATCCCG ATTCGTCAGT TGCTCAAGCA GCTTGCCGAT CACTTCCTGC GCAGTAACCC GGAGGTGAGC ATAAGCGACC TGCCAAGCGT ATGGGCGGCT TCGCGCTGGA TCAGTTTCAC CAGCGGTTTC GGCCCGGCCA GCCAGTCAAT GCTGGACGCG GTGTTGAATG CAGCACCCGG CGTTCGGCAA ACTTCCCCGG CCGATCTGCC AACCATTCGC GCTGGCAAGC ACTGGGCAGC GCAAGCATCG TCTTCCTCGG AAGACGCCGT GCTGGTGTTC TGCCCGGCGC CCACGACTTC CATCGAAGAT GAAGCCGCCT GGCGTTTGCT CGCGCACCTG GCCCAGCCGC CGTTCTATCA GCGGCTGCGG GTCGAGCTGC AATTGGGTTA CGCGGTGTTC AGTGGCCTCA GGCAGATCGA CGGAAAGACC GGCTTGCTGT TCGGTGTGCA ATCGCCCACC TGCAATGCCC AGCAACTGTT TGAGCACATC GCGGCCTTTA TCGGCAGATT GCCGCAGTTA GTCCGCGACG CAGATTTGCC TGAACAGACA AACGCCCTTG CAGCGCAGTT CGAGCCGTCG AACCTGCCGG AGCAACAGCG TGCCGACCTG CAGTGGCAGG CACACCTTGC CGGGCATCAG AGCGACCATG CGCCCACCTT GCAGCGGGCG CTGTCAAATC TGGAAACACA CTCGTTGCTG GCCTCTGCGG ATCAATTGAT CAAGGCCACA GGTGGCTGGC TGATCGTGGC CAATCGCCCT GCCAGCGCGG CCGTTCCGCA ATCCTTACCT GAACAGTAA
|
Protein sequence | MPAAHSADTQ RLTLANGLNV VLCHEPRLKR CAASLRVAAG SHDAPQAWPG LAHFLEHLFF LGTERFPAGD NLMTFVQRHG GQVNASTRER TTDFFFELPQ AAFAQGLQRL CDMLARPRMD IADQLREREV LHAEFIAWLG DSESRDQARL LTAINPEHPL RGFHAGNRYS LSVPNPAFQQ ALHDFYRGFY QAGQMTLCLT GPLPMAELQA LATNHGAVFA TGIKVTQRPP PALMTSPRQA GEQNHLLFAF EDLPDKADEA VAFFCHWLNA AQPGGLVAEL IRRGLCTSLH AAPLYQFGGQ LLLDIEFKGE PANATAISSL LFSWLGFFEA HWPTRIGEYH RLEQRRLQMC GALALANHHC RETPAQLSEQ GQKALSAFLA KLTADVDNLD PEPVDWRLPA PNPFLGTAAD DPAEAALYLR WQLPSPQPAF WRMLDAALKP LAEDARQAGV TLTFTAYGPY WQLQLNGLRE PIVAVLQQSL LRLQHPDARA QEHDEPVLIP IRQLLKQLAD HFLRSNPEVS ISDLPSVWAA SRWISFTSGF GPASQSMLDA VLNAAPGVRQ TSPADLPTIR AGKHWAAQAS SSSEDAVLVF CPAPTTSIED EAAWRLLAHL AQPPFYQRLR VELQLGYAVF SGLRQIDGKT GLLFGVQSPT CNAQQLFEHI AAFIGRLPQL VRDADLPEQT NALAAQFEPS NLPEQQRADL QWQAHLAGHQ SDHAPTLQRA LSNLETHSLL ASADQLIKAT GGWLIVANRP ASAAVPQSLP EQ
|
| |