Gene Psyr_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4583 
Symbol 
ID3370132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5444570 
End bp5445115 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID637654952 
Productglycoside hydrolase family protein 
Protein accessionYP_237651 
Protein GI66047810 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0192783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGATAA CCGTAAAACA ACTACTGCAA ATCCTCCCCA ACGCCGGCCC TAAAGCCGGC 
GTTTTCGTTC CTGCTCTCAA CATCGCCATG GCCCGTTACG CCATCGACAC CCGCCTGCGT
ATCGCCGCGT TCATTGCTCA GATAGGGCAT GAGTCCGGGC AGCTTCGTTA TGTGCGTGAG
CTAGGCAGTG ACAGCTACCT GGCGAAGTAC GACACGGGCC AGTTGGCGCT GCGTCTGGGC
AACACGCCAG AGGCAGATGG CGATGGCCAG CTGTATCGGG GCCGTGGGCT GATTCAGGTG
ACGGGGCGGA CCAACTACGA GGCGTGCGGG GAGGCGCTCG GGCTGGACTT GCTTGCCCAG
CCGCAACTGC TCGAACAACC CGACCACGCG GCCATGTCGG CGGCGTGGTT CTGGGATCGG
GCCAACCTCA ATGCGCTGGC AGACCAGGCT GATTTTCTGA TGATCACCCG CCGCATCAAT
GGCGGTACCA ACGGCCTGGC GGATCGGCAG GCGCTTTACC AGCGGGCATT GGAGGTGCTG
CCGTGA
 
Protein sequence
MLITVKQLLQ ILPNAGPKAG VFVPALNIAM ARYAIDTRLR IAAFIAQIGH ESGQLRYVRE 
LGSDSYLAKY DTGQLALRLG NTPEADGDGQ LYRGRGLIQV TGRTNYEACG EALGLDLLAQ
PQLLEQPDHA AMSAAWFWDR ANLNALADQA DFLMITRRIN GGTNGLADRQ ALYQRALEVL
P