| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4395 |
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| Symbol | |
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| ID | 3369935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5257326 |
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| End bp | 5258210 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654755 |
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| Product | type II secretion system protein |
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| Protein accession | YP_237463 |
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| Protein GI | 66047622 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGT TATTCGCCGC CATGATGCTT GCCGCTGCCG CATTTCTGCT GTTGTCAGGC
ATAGCCCGTC AACGTAGTAA TGAACGCCTG GTGGCCAGAC GCTTGAGGGG CCAGGTGATC
CGCGAGAGCC GCATCGGCAG CCTGTTGCGG TTGCTCGGCG ATACGCGCAT TGGGCAGCGC
AGTATCAGCC TGGATTCGGA AACCCAGATA CTGCTCAACC GCATCGGCTG GCGGCGCGCC
AGCAAACGCT CGTTATTCGC GGCCTGCCAG GTCGGCGTCC CGGTCGGCCT GATGGTCATT
GTCATCCTCG GCCAACTGCT GTTTTTCAAA GGCATCCAGC AACCGCTCAT CGCGCCGATC
TTTGCCCTGG GCGCCGGCTA TCTGCTGCCC AAGCGGATCC TGGCAGCCGT GGCTCGACGC
CGTCAGAAAC AAGTGGTGGT GGAAATCTCT ACCTTTATCC CTTTGCTGCG CATCCTGTTC
GAGTCCGGCA TGGCGGTCGA GCAGGCGCTT CGGGTGCTCA GCAACGAAGG CAAAGACTTG
TTGCCGGTGC TGTCCGAGGA AATCCGCGTG GTGCTGATGC GCGTTGATTC CGGCCTGGAA
CTGGGCGAAG AACTGAGAAA AACCGCAGCC CTGCTGGACG TCGACGAGCT GAGCGACACC
TGTGTGATCC TCAATCAACT GATTCATCAG GGCGGTGGCG CATTGAAGTC CCTGCTCACG
CTCAAGCAAC TGATCGACGA CCGACGCCTG ACCCGCCTGC AGGAATACAT TTCCAAACTC
TCGGCAAAAA TGTCGGTGGT CATGATGGTG TTTCTGTTCC CCGCCCTGCT GATTGTGCTG
GCCGGGCCCG GATTTATGGC AATAAGCCGC GCACTGGGCA GTTGA
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| Protein sequence | MELLFAAMML AAAAFLLLSG IARQRSNERL VARRLRGQVI RESRIGSLLR LLGDTRIGQR
SISLDSETQI LLNRIGWRRA SKRSLFAACQ VGVPVGLMVI VILGQLLFFK GIQQPLIAPI
FALGAGYLLP KRILAAVARR RQKQVVVEIS TFIPLLRILF ESGMAVEQAL RVLSNEGKDL
LPVLSEEIRV VLMRVDSGLE LGEELRKTAA LLDVDELSDT CVILNQLIHQ GGGALKSLLT
LKQLIDDRRL TRLQEYISKL SAKMSVVMMV FLFPALLIVL AGPGFMAISR ALGS
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