Gene Psyr_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3127 
Symbol 
ID3368648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3749615 
End bp3750298 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID637653472 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_236197 
Protein GI66046356 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.674952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAA TTCTGGCAAT CGAAGATGAT GCCATCACTG CAAAGGAAAT CGTGACCGAA 
CTCAGCAGCC ACGGACTGGA AGTGGACTGG GTCGACAATG GCCGTGACGG CCTGGCGCGT
GCAGTGAGTG GCGATTATGA CCTTATTACC CTGGACCGCA TGTTGCCGGA GATGGATGGT
CTGACCATCG TCACCCACTT GCGTGCCCAG GGCATTTCCA CGCCGATCCT GATGATCAGC
GCCCTTTCCG ACGTGGACGA GCGCGTTCGC GGCCTGCGTG CCGGAGGGGA CGACTATCTG
CCCAAGCCCT TCGCGTCGGA TGAGATGGCT GCGCGCGTCG AGGTGTTATT GCGACGCAGT
AACCCGGTCA GTGCCGCCAA GACGGTATTG CAGGTTGCCG ACCTGGAACT GAACCTGATC
ACCCGGGAAG CGTGTCGCGG CGGCGAGCCG CTGACCCTGC TGCCCACCGA ATTCAAGCTG
CTTGAGTTTC TGATGCGCAA CAGCGGACAG ATCATCACCC GAATGATGAT TTTTCAGGAA
GTCTGGGGCT ACCACTTCGA TCCGGGCACC AACCTGATCG ACGTTCACAT CGGCCGTCTG
CGCAAGAAGA TCGACCAACC CGGTACCGCA CAGCTCATTC AGACCGTGCG AGGATCCGGC
TATGTCATTG CCGAACCCGT CTGA
 
Protein sequence
MTRILAIEDD AITAKEIVTE LSSHGLEVDW VDNGRDGLAR AVSGDYDLIT LDRMLPEMDG 
LTIVTHLRAQ GISTPILMIS ALSDVDERVR GLRAGGDDYL PKPFASDEMA ARVEVLLRRS
NPVSAAKTVL QVADLELNLI TREACRGGEP LTLLPTEFKL LEFLMRNSGQ IITRMMIFQE
VWGYHFDPGT NLIDVHIGRL RKKIDQPGTA QLIQTVRGSG YVIAEPV