Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3127 |
Symbol | |
ID | 3368648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3749615 |
End bp | 3750298 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653472 |
Product | response regulator receiver:transcriptional regulatory protein, C-terminal |
Protein accession | YP_236197 |
Protein GI | 66046356 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.674952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAA TTCTGGCAAT CGAAGATGAT GCCATCACTG CAAAGGAAAT CGTGACCGAA CTCAGCAGCC ACGGACTGGA AGTGGACTGG GTCGACAATG GCCGTGACGG CCTGGCGCGT GCAGTGAGTG GCGATTATGA CCTTATTACC CTGGACCGCA TGTTGCCGGA GATGGATGGT CTGACCATCG TCACCCACTT GCGTGCCCAG GGCATTTCCA CGCCGATCCT GATGATCAGC GCCCTTTCCG ACGTGGACGA GCGCGTTCGC GGCCTGCGTG CCGGAGGGGA CGACTATCTG CCCAAGCCCT TCGCGTCGGA TGAGATGGCT GCGCGCGTCG AGGTGTTATT GCGACGCAGT AACCCGGTCA GTGCCGCCAA GACGGTATTG CAGGTTGCCG ACCTGGAACT GAACCTGATC ACCCGGGAAG CGTGTCGCGG CGGCGAGCCG CTGACCCTGC TGCCCACCGA ATTCAAGCTG CTTGAGTTTC TGATGCGCAA CAGCGGACAG ATCATCACCC GAATGATGAT TTTTCAGGAA GTCTGGGGCT ACCACTTCGA TCCGGGCACC AACCTGATCG ACGTTCACAT CGGCCGTCTG CGCAAGAAGA TCGACCAACC CGGTACCGCA CAGCTCATTC AGACCGTGCG AGGATCCGGC TATGTCATTG CCGAACCCGT CTGA
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Protein sequence | MTRILAIEDD AITAKEIVTE LSSHGLEVDW VDNGRDGLAR AVSGDYDLIT LDRMLPEMDG LTIVTHLRAQ GISTPILMIS ALSDVDERVR GLRAGGDDYL PKPFASDEMA ARVEVLLRRS NPVSAAKTVL QVADLELNLI TREACRGGEP LTLLPTEFKL LEFLMRNSGQ IITRMMIFQE VWGYHFDPGT NLIDVHIGRL RKKIDQPGTA QLIQTVRGSG YVIAEPV
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