| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2993 |
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| Symbol | |
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| ID | 3368513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3585283 |
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| End bp | 3587097 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653339 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_236065 |
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| Protein GI | 66046224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0819444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.831976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC GTACAGACGA TAACTGGCGC CACGGCGCCG TTTTGTTGGA CCCTGAACAC
ACCCGGTTTG CCCTCTGGGC ACCGGATACC TCATTCGTGA ATGTCGAACT GCAGGATGGC
CAGTCACTGG CCATGCTGCC GCAGTCCGAC GGCTGGTTCG TACTTGAGGC CCGCTGCAAG
GCGGGTACCC GCTACCGCTT CAGGATCGAC CACGAGCTGG ACGTTCCTGA TCCCGCCTCC
CGGGCACAGG TTGATGATGT TCACTCTGAA AGCCTCGTAG TCGACCCTCA CGCTTATTCA
TGGCAGAACA CTGCATGGAA CGGTCGTCCA TGGCATGAAG CAGTGATCTA TGAGCTGCAC
GTGGGCGCCA TGGGTGGCTA CGCCGGGGTG GAAAAGCACC TGCCGCGACT TGCCCGACTG
GGCGTTACCG CGATCGAGCT GATGCCGCTT GCGCAGTTCC CCGGTGATCG CAACTGGGGC
TACGATGGCG TTCTGCATTA TGCTCCGCAA TCGTCCTATG GCACGCCTGA ACAGCTCAAG
CACCTGATCG ACACCGCTCA CGGTCTTGGC CTGATGGTTA TCCTGGACGT GGTGTACAAC
CACTTCGGCC CGGACGGCAA CTATCTGGGC AGTTATGCCA AGGAGTTTTT CCGCAGCGAC
CTGCACACCC CGTGGGGCGA TGCGATCGAC TTCAGACGTC CGCAGGTGCG CGACTTTTTT
GTCGACAATG CCCTGATGTG GCTCCTTGAG TACCGCTTCG ACGGCCTGCG CATGGACGCT
GTTCACGCCA TTCGCGACAA GACCTTCCTG CCGGAGTTTG CGGAGCGGGT TCGTAGCCGC
ATTGAACCCG GCAGACACGT GTGGCTGAAC CTGGAGAACG AGTTCAACCA GGCCAGCCTT
CTGGAAAAAG GTTTCGATGC ACAGTGGGAC GACGACGGGC ACAACACCCT CCACGTGCTG
CTGACCGGTG AAACCGACGC CTACTATTCC GACTTCGCCA AAGAGCCGAC GCAAAAACTT
GCGCGCCTGC TCAGCGAGGG GTTTGTCTAT CAAGGCGAAC CGACGCGCCA CGGGCATACG
CGAGGCGAGC CAAGTGCGCA CCTGCCGCCG TCGGCTTTTG TGTTGTTTCT GCAGAACCAT
GATCAGATCG GCAACCGCGC ACTCGGTGAA CGCTTGCCGC AACTCTGTGC GCCTGCTGCA
TTGAAAGCCG CCACCGCCCT GCTGCTGCTT TCACCGATGA TTCCGCTGAT GTTCATGGGC
GATGAATGGG CGGCCAGCGA GCCGTTTCTG TTCTTCACCA GCCACCACGG CGAACTGGCC
GATGCGGTAC GCGAGGGACG TCGCAAGGAG TTCGCTGATT TCGCCGCGTT CGCCGACCCG
GAAAAGCGCG AGCACATTCC TGATCCGAAC GACATCAAGA CGTTCGAAGC CTCACGCCCG
GCATTTTCCG CAGTCGATCT CGACACCGAC ATAGGTCAGG ATCATCGCAG CTGGCTGCAG
TTCTACACGC AGTTGCTGGC TTTACGGCAC CAGGAAATCA TGCCACGCCT GCAGGGCGCA
CGCTTCCTGA GTACCGATAT TCTCGGCGAC AAGGCGGTCA GCGCGCGCTG GACGCTGGGC
GATGGCAGCG AACTGCGTAT CGACCTCAAT CTCAGCGAGC ATGCGGTCGA CGCGCCACCA
CAAACGGGTG CCCGCGAGAT ATTCTCCAGC GCCGAAAAAT CGTCCGAACT TTCCCCACCC
GGCACCCTCA ATGCTTACAC GGCCATTGTC AGCCTGAAAG CGAGTGATGT TCTGGAGGAA
CAGGATGAAC AATGA
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| Protein sequence | MPLRTDDNWR HGAVLLDPEH TRFALWAPDT SFVNVELQDG QSLAMLPQSD GWFVLEARCK
AGTRYRFRID HELDVPDPAS RAQVDDVHSE SLVVDPHAYS WQNTAWNGRP WHEAVIYELH
VGAMGGYAGV EKHLPRLARL GVTAIELMPL AQFPGDRNWG YDGVLHYAPQ SSYGTPEQLK
HLIDTAHGLG LMVILDVVYN HFGPDGNYLG SYAKEFFRSD LHTPWGDAID FRRPQVRDFF
VDNALMWLLE YRFDGLRMDA VHAIRDKTFL PEFAERVRSR IEPGRHVWLN LENEFNQASL
LEKGFDAQWD DDGHNTLHVL LTGETDAYYS DFAKEPTQKL ARLLSEGFVY QGEPTRHGHT
RGEPSAHLPP SAFVLFLQNH DQIGNRALGE RLPQLCAPAA LKAATALLLL SPMIPLMFMG
DEWAASEPFL FFTSHHGELA DAVREGRRKE FADFAAFADP EKREHIPDPN DIKTFEASRP
AFSAVDLDTD IGQDHRSWLQ FYTQLLALRH QEIMPRLQGA RFLSTDILGD KAVSARWTLG
DGSELRIDLN LSEHAVDAPP QTGAREIFSS AEKSSELSPP GTLNAYTAIV SLKASDVLEE
QDEQ
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