Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2948 |
Symbol | |
ID | 3368468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3537212 |
End bp | 3537856 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637653294 |
Product | nitroreductase |
Protein accession | YP_236020 |
Protein GI | 66046179 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.5003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTTTCCCC CTTACGGCAC AGAGAGCACC ATGTCTATTA TCGCTGACCT CATCAAGTCC CGAATTTCCG CCAACAACTA CGACACTGAG CGCAAACTCT CAGATCAAGC GATCACTGAT CTGATTGATC TGGCCACCCA TGCGCCGTCC GCCTTCAACC TTCAAAACTG GCGTTTCGTA GCCATACGCA GTGAAGAAGC AAAAGCACGT TTGCTGCCCT TGGCCTATGG ACAAAAGAAG GTGGTGGATT CAGCCGTGAC ATTTATTGTG TGTGGCACCC TGAATCCGCA TCAAACGATT GCAACGTCGC TGAAGCCTTC GATGGATGCC GGGGTCATCG ACAAGGCCAT TTATGACATG TGGGTGGGCG CCGTTCAGGG TATGTACGCT GAAAATCCAC AACTGCAGCG CGATGAAGCC ATCCGTTCAG GCTCGCTGGC CGCCATGACG CTGATGCTTG CAGCTAAAGG CCAAGGCCTT GATTCAACCC CCATGATCGG CTTTGACCCA GCGGCGGTTG CAGAAGCATT CAATCTTTCA GCTACTGAAA TCCCCGTGAT GCTGGTGACC GTCGGTTATC CAGGCGAGAG CAACTGGCCG CAAAAGCCGC GTAAAGCCGT TCGCGAAGTG CTTGAGTTTA TCTAG
|
Protein sequence | MFPPYGTEST MSIIADLIKS RISANNYDTE RKLSDQAITD LIDLATHAPS AFNLQNWRFV AIRSEEAKAR LLPLAYGQKK VVDSAVTFIV CGTLNPHQTI ATSLKPSMDA GVIDKAIYDM WVGAVQGMYA ENPQLQRDEA IRSGSLAAMT LMLAAKGQGL DSTPMIGFDP AAVAEAFNLS ATEIPVMLVT VGYPGESNWP QKPRKAVREV LEFI
|
| |