Gene Psyr_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2948 
Symbol 
ID3368468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3537212 
End bp3537856 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content53% 
IMG OID637653294 
Productnitroreductase 
Protein accessionYP_236020 
Protein GI66046179 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.5003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCCCC CTTACGGCAC AGAGAGCACC ATGTCTATTA TCGCTGACCT CATCAAGTCC 
CGAATTTCCG CCAACAACTA CGACACTGAG CGCAAACTCT CAGATCAAGC GATCACTGAT
CTGATTGATC TGGCCACCCA TGCGCCGTCC GCCTTCAACC TTCAAAACTG GCGTTTCGTA
GCCATACGCA GTGAAGAAGC AAAAGCACGT TTGCTGCCCT TGGCCTATGG ACAAAAGAAG
GTGGTGGATT CAGCCGTGAC ATTTATTGTG TGTGGCACCC TGAATCCGCA TCAAACGATT
GCAACGTCGC TGAAGCCTTC GATGGATGCC GGGGTCATCG ACAAGGCCAT TTATGACATG
TGGGTGGGCG CCGTTCAGGG TATGTACGCT GAAAATCCAC AACTGCAGCG CGATGAAGCC
ATCCGTTCAG GCTCGCTGGC CGCCATGACG CTGATGCTTG CAGCTAAAGG CCAAGGCCTT
GATTCAACCC CCATGATCGG CTTTGACCCA GCGGCGGTTG CAGAAGCATT CAATCTTTCA
GCTACTGAAA TCCCCGTGAT GCTGGTGACC GTCGGTTATC CAGGCGAGAG CAACTGGCCG
CAAAAGCCGC GTAAAGCCGT TCGCGAAGTG CTTGAGTTTA TCTAG
 
Protein sequence
MFPPYGTEST MSIIADLIKS RISANNYDTE RKLSDQAITD LIDLATHAPS AFNLQNWRFV 
AIRSEEAKAR LLPLAYGQKK VVDSAVTFIV CGTLNPHQTI ATSLKPSMDA GVIDKAIYDM
WVGAVQGMYA ENPQLQRDEA IRSGSLAAMT LMLAAKGQGL DSTPMIGFDP AAVAEAFNLS
ATEIPVMLVT VGYPGESNWP QKPRKAVREV LEFI