Gene Psyr_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2623 
Symbol 
ID3368140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3182993 
End bp3184252 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content58% 
IMG OID637652971 
Producthypothetical protein 
Protein accessionYP_235700 
Protein GI66045859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00179753 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA TCACTATCGA CGCCACGTCC CACCCTGCCG AGCTGCTGAA CACACTGGAG 
AGCAAGGTTG CGTTGCTGCG TCGCCACTTT CCGCCCAGCG TGTCCAGGCT GTTTGCCATT
CCGCGTGCGG GTACCGACGG CACGCTGCAA TGGTGGTCTG AACTAGGCGG TCAGCACTTG
CCGTATCACA GCCTCGACGC TGGCGCGCAA CAGGCGTTGC TCGCACGCTA CCTGCAGCGC
CAGCAAGCCA TTGTGCAGTT GGCGGATGAG CTGCAGGCGC GCGATAGAGC TGATGAGGCC
AATAGTCTTC GTACGCTTGT CGGCGCCCCT GCGCTGAACA ACCTTTATAG TCTCAATGAC
GAGCCTGTAG TCATCCGCTG GGGTATGGCG CAGCCAGTGG CCCCTGCAAT CCCGTCGACA
TTACCAGTGT CATCACTCGC CAGCCCGGCA TCAAGGCGAT GGTGGCTGCG TATTCCGGTT
TTGCTGCTAT TACTGCCGTT ACTGTTGATA CTACTGTGGC TGCTATGGGC ATGGCGCGGG
AGCGTGTGGA ACGTGTTCAA TACGGCCCCT ATGGGTAATT ACTCATGCAC ACAGGGTGTG
CCCGCCCCTG ACTTTGCCGT GGTGCTGGAT ACTTCCGGCT CGATGAATCT GAACATCGAT
ACGTCTTCTG AAGACGAGGC CTGGATGTAT CAGGTCGGTG GCGCGCTTCC CGCCGACAAC
CCGAGAAAAG CTCGCGTGCT TGCTGAACCG ACTCGCCTGA CTGTCGCCAA GCAAGCCTTT
GGCGCGATGC TCGGGCAACT GCACCCAGAC ATTGATACAC GCTTGATCAC TTTTCAAGGC
TGTGAGGGCA CGGTCGATCA AGGCGTGTTC CAGCGTGATG CGCGTCAGCA ATTGCTGGCC
GGGGTTGGAA AACTCAGCGC GGACGGGGGT ACGCCATTAG TCGCCAGCCT TATCAAGTCG
GCAAGTCTGG TGGACGGGCG TTTTAAAGAT GCCTTGGTGG TCATGTTTGT CGATGGCGAG
GACGGTTGTG GGCAAAACGC TTGCGAGGTG TCCGCCCGTA TCGCCCGTCA GCAGCCAAGA
TTGCGGATCA ATGTTGTCAA TATCAGCGAT AGCAAGCTTT CAAACTGTAT CGCTGAAAAT
ACCGGTGGCC GTGTATATGC CGCGCGCGAA GCGGGAGAGG TACAAAGGAT GCTGCGCGAA
GCCATGGAAG AAGTCGCAGC GGCCCCCGCG TGTACAGAGA AAAAAATCCC CGGCGAGTGA
 
Protein sequence
MQRITIDATS HPAELLNTLE SKVALLRRHF PPSVSRLFAI PRAGTDGTLQ WWSELGGQHL 
PYHSLDAGAQ QALLARYLQR QQAIVQLADE LQARDRADEA NSLRTLVGAP ALNNLYSLND
EPVVIRWGMA QPVAPAIPST LPVSSLASPA SRRWWLRIPV LLLLLPLLLI LLWLLWAWRG
SVWNVFNTAP MGNYSCTQGV PAPDFAVVLD TSGSMNLNID TSSEDEAWMY QVGGALPADN
PRKARVLAEP TRLTVAKQAF GAMLGQLHPD IDTRLITFQG CEGTVDQGVF QRDARQQLLA
GVGKLSADGG TPLVASLIKS ASLVDGRFKD ALVVMFVDGE DGCGQNACEV SARIARQQPR
LRINVVNISD SKLSNCIAEN TGGRVYAARE AGEVQRMLRE AMEEVAAAPA CTEKKIPGE