| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1520 |
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| Symbol | |
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| ID | 3367019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1708268 |
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| End bp | 1710220 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637651862 |
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| Product | SNF2-related:helicase, C-terminal |
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| Protein accession | YP_234608 |
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| Protein GI | 66044767 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.254537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0669938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGG CCCAATTGAT GAACAAGCGT CCGGTATTGC TTCGCAAAGC CATTTTCGAT
GGCTACGACT TCGGGCTGTC CCTCAGTTAC CTACAAGGTG CAAACAAGCT TTTGCTTCGC
CGGAGGGGCT TTTTCATACG CAGGTCTGAT CACCCACTGA ACCAGTTTTG GCGTGTGCCC
AAAGACAAGC TACTCGATGA CCTCGATGTG CTCTATCGGG AGCTGGCAGA GCTCGCAGAT
GGCAAACACA TCGAAAGCTG GCAAGCATTC AGAGACAGGA TTACCTCTGC CCAGTCCGAC
GTGCACCGTG ACGCATTCAC CTGGGGGATG AAGTTCAGGC TCGCGCCGCT GGCGGAAGGC
GGTGTGATCC TGTCGGGAGA TTTTCATCCT GGTGCTGTAG CAATCGCCAA GCGCATGCGT
GGGGTGTTCC TCTCGGCGGG CAAAGCCTGG CGAGTGCAGG GCACACCAGA ATTGGTTCGC
AGTAACCTGA TTCTGGAACT GGGATTGGAC GAAGATCAGT TCGAAATTCT GGACACGCTG
CAGGAGTTGC TCGCTGACGG GTCGGTCAAG GCGGTGAATG AGGTCACCAG TATCAGTCTG
GGTGGCCACT CTCCGGAGTC GACCAAAAGC GAAGAGGAAG TTTCAGATTC AGGTATCTAC
CTGGCATCTG TCCCATCCAT CAAAAACACC GAGCTGACCA GTGCCGATAT CGATAAGGCG
CTGGAAGGAT TCTCGCTGAT GGATCATCAG CCAGCAGGAA TCAAGCACCT GCTGCAGCGC
ACGAGCGCGC TACTGGCCGA CGACATGGGA CTGGGCAAAA CTCGCCAGGC TGTGATCGCC
GCTGGCATAC GCGCACAAGG TAAACCGGTT CTGGTTATTG TGCTCAACAG CCTGATCATC
AACTGGCAGC GCGAGATCCT GATGGTGTTT CCCCAAGCTC AGATCGCCAT GCAAACCTTT
GATGCCAGTG CTGGCTGGAT CATCGTGAAC TACGAGAGGC TGGGTGATTT TGTCATGCAC
GCGAGCCGTT TCGCGGTGAT GGTCATTGAC GAGGCTCACC GACTCAAGGA ACCCACTGCA
GCGTGGACAC GCCACGGCTT CGACATTGCT GCCCAAGTAC AAAACCGCTA CCTGTTGACG
GGCACGCCAG TGCTCAATCG CGAAGCGGAG CTGCACACAC TGCTGAGGCT TTCAGGCCAT
CCAATCGGAC AACTGCCCCT CAATGAGTTC TGCGAGCGAT TCGCCGGCAG TCCTGAGTTT
CGCAAGACGC TTAGAGATGA GATATCCGAC TGGATGCTTC GTCGCCGTAA GGATGTGCTG
CCCAACCTGA AGGGGAAGCA GCGGCAGACT GTACCGGTGA TACTGAGCCA GATAGAACGT
GACGAGTACA ACCAGATCAT GCGGAGCGAC CAGCACCGAT TCGCAAGGCT GGGCGCACTG
CGTCAACTGC TCGAACGCGT GAAGGTACGG ATCCTGGCGG ATCTGATGGC CGAGCTGGAC
GTCGACGACA AGGTTATCCT CTTCTGCGAG TATCAGGAAT CCGTGGCCAC GTTGCGTGAG
CACTGCATCA AGATGGGCGT CGGGTGCGTG ACGTTGGTAG GCAGTGACTC GCCCAAGAAA
CGACAGAAGG CGATTGATGC TTTCCAGCAG GATCCGGACT GCAGGGTGTT CATCGGGACC
AGGTCGGCCG CCGGAACAGG TTACAACCTG ACTGCTGCGA ACTATGTCTT TTTTTTGGGG
CTTCCATGGA CACCGGGGCT GCAGGACCAA GCTGAGGATC GAGCTTATCG CAACGGGCAG
TTGCGCATGG TTGTCGTCAA AATCCCTCTA GCTGAGGACA CCATCGACCA GCAGCTGTGG
CAGATGCTCA TGGATAAGCG CGCCCTGGCC AGCGATCTGA TCGATCCGGA AGCGGAGGAG
TCGAGCAAAA AAGCCCTTGC CGAGATTCTT TAA
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| Protein sequence | MASAQLMNKR PVLLRKAIFD GYDFGLSLSY LQGANKLLLR RRGFFIRRSD HPLNQFWRVP
KDKLLDDLDV LYRELAELAD GKHIESWQAF RDRITSAQSD VHRDAFTWGM KFRLAPLAEG
GVILSGDFHP GAVAIAKRMR GVFLSAGKAW RVQGTPELVR SNLILELGLD EDQFEILDTL
QELLADGSVK AVNEVTSISL GGHSPESTKS EEEVSDSGIY LASVPSIKNT ELTSADIDKA
LEGFSLMDHQ PAGIKHLLQR TSALLADDMG LGKTRQAVIA AGIRAQGKPV LVIVLNSLII
NWQREILMVF PQAQIAMQTF DASAGWIIVN YERLGDFVMH ASRFAVMVID EAHRLKEPTA
AWTRHGFDIA AQVQNRYLLT GTPVLNREAE LHTLLRLSGH PIGQLPLNEF CERFAGSPEF
RKTLRDEISD WMLRRRKDVL PNLKGKQRQT VPVILSQIER DEYNQIMRSD QHRFARLGAL
RQLLERVKVR ILADLMAELD VDDKVILFCE YQESVATLRE HCIKMGVGCV TLVGSDSPKK
RQKAIDAFQQ DPDCRVFIGT RSAAGTGYNL TAANYVFFLG LPWTPGLQDQ AEDRAYRNGQ
LRMVVVKIPL AEDTIDQQLW QMLMDKRALA SDLIDPEAEE SSKKALAEIL
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