| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1518 |
|---|
| Symbol | |
|---|
| ID | 3367017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1705406 |
|---|
| End bp | 1706539 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234606 |
|---|
| Protein GI | 66044765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.612277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.106236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGGC AGCTTTCTAC ACTTTCCATA CTCGCGTTGT TCGCCGGATG CACGTCTGTA
GCGGACAAAC CGGTTGGACC AGCTTTCGAT AGCAGCCAGA ATCCTGAGCT GCTCTCGCCA
GACCTGTACT CAAGTGGCGC CAAGTCCGGT CAGGAGCCGA TGGTTCGCTA TGGTCGATAC
GCTCTGGTGA ATACCGCTCC AGAGGCCGAA CAGCGTGACC TGATGGCCCA GATCATCGAT
GTCAGCATTC CGGCCAATAT GCATCCGTCC GTCCAGGATG CGATGCAGTA TGTGGTCAGC
CGCTCAGGCT ACACCTTGTG CCCACCGAGC ACCGGTCACG TAATCATCTT GTTCACACGC
CCTCTTCCTG CTGCCCAGTA CAAGCTAGGG CCAATGAGCC TGCGCAACAC GCTGCAGGTA
CTGGCCGGTC CGGCATGGCA GGTCAAGGTC AACGAAGTAA CGCGCGGTGT GTGTTTTGTA
CTGCGGCCAG GTTACCAACT GCCGGAGACG TCTAAGCCCG TGGCACTGGC TCAACCTGCG
CAACCGGCCA GCACTGGATC AACCTCGGTA GCCAGCACCT CCCCTGCCGT TACCGTTGTA
ACTGCCCCGG CAACCGGAAC CCCATTCAGC AAGGACACAT CGCCTGCAGG GCAACCGCAA
ACCACGGTCG TCACGCAGGC AAAAGCGCAA CCAGCTGCAT CCATCAGCAC CCCAGCCAAG
GAAGGCACCC CTACACAGCA AAAGCCGACT CCTGTGAGCG CGGCTCCGGC GAAGGCCACA
TCTCAGACCA CCGTCACCAA GAGCATCGCT TCGACCAGCC AGGCTCCGAT GAAACCTGAA
CCAGCAGCGA AACCCGTAGC AACCGTTGCG CCACAGCAAA CGTGGAATGC ACCTGTGGGC
AGTACCTTGC GTCAATCGGT CGAAGACTGG GCCAAGCGGG CCGGCTGGCA GGTTATCTGG
GTACCGGAGG ACCTGGACTA CCCCATCGAA GCACCGCTGA GTTTTACAGG CTCCTTCAGT
TCGGCGGTCA GGCAGATATT CCCGCTGTAC GACAACGCCA AACGGTCCTT TGTGGTGGAC
GGTAATGAGG GCAATGGTCA GCAGGTTCTG CACGTATCGG AGAGGAAAAA ATGA
|
|---|
| Protein sequence | MIRQLSTLSI LALFAGCTSV ADKPVGPAFD SSQNPELLSP DLYSSGAKSG QEPMVRYGRY
ALVNTAPEAE QRDLMAQIID VSIPANMHPS VQDAMQYVVS RSGYTLCPPS TGHVIILFTR
PLPAAQYKLG PMSLRNTLQV LAGPAWQVKV NEVTRGVCFV LRPGYQLPET SKPVALAQPA
QPASTGSTSV ASTSPAVTVV TAPATGTPFS KDTSPAGQPQ TTVVTQAKAQ PAASISTPAK
EGTPTQQKPT PVSAAPAKAT SQTTVTKSIA STSQAPMKPE PAAKPVATVA PQQTWNAPVG
STLRQSVEDW AKRAGWQVIW VPEDLDYPIE APLSFTGSFS SAVRQIFPLY DNAKRSFVVD
GNEGNGQQVL HVSERKK
|
|---|
| |