| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1428 |
|---|
| Symbol | |
|---|
| ID | 3366927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1616775 |
|---|
| End bp | 1618142 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234517 |
|---|
| Protein GI | 66044676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.457387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG CTGCCTTTCT GACTATTGCA TTCATGAGCA CCCTGACAGC CCATACTGCT
CTCGCCGAAA TCCCGGGAAT CAATGCAAGC TCATCGGGCA GCGTGATCGG TGACGACGTG
CTCTACAGCG TTGGAGGCGG CAACGCTGTG ACGATGGGTA CGGCGGGGAA TATGGATAGC
ATCAGCATCG GCGGTGGCTG GAACAGCAAC CTGGTCTGCG GAAACATGAG TATGAATAAC
ACGCTCCAGA ATCAGTTGAA TGGAGCAACT TCCGGATTTC AGACGATCAT GGGGTCGATG
ATCTCGAACG CTACCAGCGC CGTTTCATCA CTACCAGGAC TGATTATCCA GCGGGCTAAC
CCGGCTTTGT ACAACCTGCT CACCAACGGC ATTCTGCAGG GTCGTCTTGA CTTCGACCGC
TCCAAAGGCA CTTGCCGTGC CATTGCTGAC AAGATGCTCG ATGTCGCTGG AGGACAGATG
GGCTGGAACA AGATCGCCGA GGGCCAGGCT ATGAGTCAGG CGGTGAAAAA CGGGAACACA
GATGCTGTCT CAGCCGTTGC ACAGGTCGAA AAGCAGGGAG GGAATGACGG TATCACCTGG
CTCGGAGGAA ATAAGGCCGG CGGATCTGGC CAGCAACCTA TCAAGGTCGT AGGTGACGTT
ACTCGTGCGG GATACAACTT GCTGAACGGA CGCGGCGCTG CCGATACATC GTCCATTAGT
CCTTCGGCCT GCAACAACGG CATGGTGTGT TCCACCTGGT CCTCGCCTCA GGCAGCTACC
ACGTTCGCCA ACCGGGTACT GGGAGAGCAA CAACAACGCA CTTGTGAGGA TTGCACCAAA
ACAACCTCCA CTGCCGGCGT TGGCCTCACA CCTCTCATCC AGGAATCCTA CGACTCCAAG
CTCAAGGCGC TGCAGGAATT GATCTCGGGC AGCAAAGCGC TCACCTTGGA AAACTTGACT
GCAGCGAGTA GCGATTCTCT GCCTGTTACC CGTGGTGTGG TCGAGGCACT CAGGACTGAG
CATGACCAGG ATATCCTGGC AAAACGTCTT GCTTCAGAGG TCGCGCTATC TGAGGTTCTC
GGCAAAGCGC TACTGCTTCA GCGCACCATG TTCACCGGCA GCAAAGAGCC GAACATTGCC
GCCAACGATG TGGCCCTGCA GGCGGTCAGT CAGCAGAACA GCAGCCTGCA ACAGGAAATT
GACAACCTCA AGACCGAGTT GGATATGCGT CGCAGCTTGG CCAGCAACTC ACCGACAGCC
ATCCTACAGA GGGCTCAGAG CCGGAAGGAC AGCTCCAAAG GCATCTTTCA AGGAGATCCA
ACGCCCGACC GCCTCGATCA GCTGCAGAAC CCTGCGAAAG GTAACTGA
|
|---|
| Protein sequence | MRRAAFLTIA FMSTLTAHTA LAEIPGINAS SSGSVIGDDV LYSVGGGNAV TMGTAGNMDS
ISIGGGWNSN LVCGNMSMNN TLQNQLNGAT SGFQTIMGSM ISNATSAVSS LPGLIIQRAN
PALYNLLTNG ILQGRLDFDR SKGTCRAIAD KMLDVAGGQM GWNKIAEGQA MSQAVKNGNT
DAVSAVAQVE KQGGNDGITW LGGNKAGGSG QQPIKVVGDV TRAGYNLLNG RGAADTSSIS
PSACNNGMVC STWSSPQAAT TFANRVLGEQ QQRTCEDCTK TTSTAGVGLT PLIQESYDSK
LKALQELISG SKALTLENLT AASSDSLPVT RGVVEALRTE HDQDILAKRL ASEVALSEVL
GKALLLQRTM FTGSKEPNIA ANDVALQAVS QQNSSLQQEI DNLKTELDMR RSLASNSPTA
ILQRAQSRKD SSKGIFQGDP TPDRLDQLQN PAKGN
|
|---|
| |