Gene Psyr_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0910 
Symbol 
ID3366402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1032421 
End bp1033152 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID637651253 
Producthelix-turn-helix, AraC type 
Protein accessionYP_234006 
Protein GI66044165 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTAA GCCTTGAAGT TCGCAGCTAT GAGAGGAAAG AACCTCACCT CCACCACCAC 
GAGCATGCTC AATTGGTACT GCCGATTCGT GGCGAAATGG AAATTGACGT AAACGGTCGC
GGCGGCTGCA TCGATCAGTC ATTGGCGGCG CTTGTGAAAC CTGGCTCTGT GCACTCGCAG
CACAGTGACG TCGACAGCCG CTTTTTAGTG TTGGACTGTG CGCCTACGAT TTTAGAAACT
CTCCAGATCG GGCGTCTGGC TCGGAGAATA TATGTGCCTA TTCCCCCTGC AACACGTCGG
CTTATCGAGT TCGCCGATCT AATAGGCAAC GCGCAGCTAT CCATCGCGGC CTCCCAATTG
GCGCCTCTGC TTTTGTCGTC CCTGAATCCG GACATTTCCT GCTTTTCAGA CCCCATGGAG
CAATTGATCG CTCGTCTTCG GGCGGATCCC GGAGCGAACT GGAGCAATGA GGCCATGGCT
CAAGTAGCAA AAATGAGCAT GAGTCAGTTG CACCAGCGAT TCCGGCTATT GTTCGAGATA
AGTCCTCAAG CATGGTTGAC CAGGTTACGC ATACAAGAAG CTCAACGATG GTTGCGTGGA
ACCTCATTAC CAATATCCGA GATTGCCTTG CGGGCAGGTT TTTCCGACCA GGCGTCACTG
ACCCGCACCA TGCAGCGTGT GAGCGCCACG ACCCCGGCGG CTTATCGTAA AGCGCAAAAA
CAGTTCGGGT AA
 
Protein sequence
MFLSLEVRSY ERKEPHLHHH EHAQLVLPIR GEMEIDVNGR GGCIDQSLAA LVKPGSVHSQ 
HSDVDSRFLV LDCAPTILET LQIGRLARRI YVPIPPATRR LIEFADLIGN AQLSIAASQL
APLLLSSLNP DISCFSDPME QLIARLRADP GANWSNEAMA QVAKMSMSQL HQRFRLLFEI
SPQAWLTRLR IQEAQRWLRG TSLPISEIAL RAGFSDQASL TRTMQRVSAT TPAAYRKAQK
QFG