Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0910 |
Symbol | |
ID | 3366402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1032421 |
End bp | 1033152 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637651253 |
Product | helix-turn-helix, AraC type |
Protein accession | YP_234006 |
Protein GI | 66044165 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTAA GCCTTGAAGT TCGCAGCTAT GAGAGGAAAG AACCTCACCT CCACCACCAC GAGCATGCTC AATTGGTACT GCCGATTCGT GGCGAAATGG AAATTGACGT AAACGGTCGC GGCGGCTGCA TCGATCAGTC ATTGGCGGCG CTTGTGAAAC CTGGCTCTGT GCACTCGCAG CACAGTGACG TCGACAGCCG CTTTTTAGTG TTGGACTGTG CGCCTACGAT TTTAGAAACT CTCCAGATCG GGCGTCTGGC TCGGAGAATA TATGTGCCTA TTCCCCCTGC AACACGTCGG CTTATCGAGT TCGCCGATCT AATAGGCAAC GCGCAGCTAT CCATCGCGGC CTCCCAATTG GCGCCTCTGC TTTTGTCGTC CCTGAATCCG GACATTTCCT GCTTTTCAGA CCCCATGGAG CAATTGATCG CTCGTCTTCG GGCGGATCCC GGAGCGAACT GGAGCAATGA GGCCATGGCT CAAGTAGCAA AAATGAGCAT GAGTCAGTTG CACCAGCGAT TCCGGCTATT GTTCGAGATA AGTCCTCAAG CATGGTTGAC CAGGTTACGC ATACAAGAAG CTCAACGATG GTTGCGTGGA ACCTCATTAC CAATATCCGA GATTGCCTTG CGGGCAGGTT TTTCCGACCA GGCGTCACTG ACCCGCACCA TGCAGCGTGT GAGCGCCACG ACCCCGGCGG CTTATCGTAA AGCGCAAAAA CAGTTCGGGT AA
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Protein sequence | MFLSLEVRSY ERKEPHLHHH EHAQLVLPIR GEMEIDVNGR GGCIDQSLAA LVKPGSVHSQ HSDVDSRFLV LDCAPTILET LQIGRLARRI YVPIPPATRR LIEFADLIGN AQLSIAASQL APLLLSSLNP DISCFSDPME QLIARLRADP GANWSNEAMA QVAKMSMSQL HQRFRLLFEI SPQAWLTRLR IQEAQRWLRG TSLPISEIAL RAGFSDQASL TRTMQRVSAT TPAAYRKAQK QFG
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