| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0883 |
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| Symbol | |
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| ID | 3366375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1005013 |
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| End bp | 1007049 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637651226 |
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| Product | S-type Pyocin |
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| Protein accession | YP_233979 |
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| Protein GI | 66044138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.429643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAA ACGTCATTAC TCTTCCACCC ACAATCGTAA CACCTGGCCA GCCGTTGCCC
AGGCCATTAG GCCCGCTGTC AGGAGCCGGA GTAATCGCCA GACCGCTGCG ATGGGACGGC
ACTATTCCTG CAAACCATGA GCTGGATGCA TTCTTCAGTA AAAGGGGTAT AAGAAACGAG
CAGTACACGA TATCCATTAT CGTGACGGCC TCTTCAACAC AGCAAAACAT CCATCAGTCT
TACATAGACT TTTTGCCCCT CCTTCCGGCT GACGTTGACG CGGAAATTTC TGCCGGCGTA
GGAGATTACC CCTTCTCTGA GTTAGAAAAG TCTACGATTG AAAAAAACGT GGTGGACAGC
CTGATTTCAC AGCGCGCTGC TGAGTTAGCC AAGAGTAACG AAGGCGCTCA TGCTTTCTTT
GGCAGGCATG TATTGGCGGT AGATATTAAA AAAAACGCTG TGGATTTTTT AAATATCTTT
CAAACAAGAA GAGACCTGGG CTCTCCCCTT GACGTTTATA AAAGCTGGGA AGCCTCAGTT
ACAGCAGCCT ACAGAGCAAA AATTCTTGAA GAGAAAATCA GGATGCTCAC AGAGAGGTCG
GTATCACTGA GCCATACTAT TGCTGCAGCG CAGGCCAGGG AGGACGCACG TATCGCGGCA
GAAGCCGAGT CGACGAGGCT TGCCGTTGAA GCTGCAGAGC ACGCTCGACT TGCTGCCGAA
ACCGCTGAAC AAGCCCGAGT TGCAGTAGAG GCTGAAGCCA AGCGAGTAGC GGATGAGCAG
GCTCTTCTTG CTGCCGAAGC AGAAGCTCGC CGAGTAGCTG CCGAAGCGGC TGAACAAGCT
CGTATGGAGG CAGAGACGCA GGCCCAGCGT GACGTTGACG AGCACGCGCG CGTGACGGCA
GAAGCTCAAG CGCTAGAAGC GGGCAAGACG CTCAGGCTCC CGGAAGCGGG TACACCGCAG
TTGGGTGCAG TTGCAGGAGT CATTTCCGTT ACAGCAGGAT CCGGTCTCTT TCTGGACGCT
ACCATTCAAG CCGCTATCGA AATATTAACG GCTCTCGCAG GCACGGCTGT CAGCTCTACC
ACAGCCGTAG GCATCGGCAC GTTGCTGTAC TCCCCTTCGC TTGGCAATGG AGAGTTACCG
GAAAGAATGC TGGACCTTCC GGCCAGGGTT CTGATGCCTG ATCTGCCCGA CGCCTTGAAT
GACGTGGCGG CAACGGGTGG AACGGTCGAT ATGCCCTATA GAATTTACGG CGATCAGTCG
AAGTATTCAG TCGTGGCAAC ACAAGCCGAA GGCGGATTTT CTCCCAAGGT GCCTGTGAGG
GCTCTGATAC TGGACCCAGT GGCCAACGCC TACACCTTTA CCACTTCGGA CACCCCGCCC
ATCACCTTGA CGTTTCCAAT CGCAGCACCT GGAAACAGCT CAACGACGAC GGTGGCGCAA
CCAGTCGAAA TTCCGGCGTA CGCTGGAATT ACACTGGAAC CTATCGAGGT GAAAGCCGAG
CCTTTACCCG CCACCGGCCA GATGGACATT CGGGACGCCA TTTACGTTTA TCCTTTAAAT
TCGGGTTTGC CTCCGGTCTA TGCCGTGTTC AACAGCCCCT ATGAAGGGGC AACAACCAAA
GGAGAGCATA GCGGTCGAAT GTACGATCCT GAAAAAGCGG GCGGCCCCAC CCAAAACCTT
GACTGGACAA CCGCCTCAGT CACTCAGGAC GGCATTGATC TCGTTAAGCT GCACACAGGC
CGATTCGGCT CATCAGATGC AAATACTATA ATGATTGATC GTCTGGAAAA AATTTTGCGC
GGCGAGTTAG CCGTGACGGA TACTGATAAA AGATTTTACA CCCACGAGCT CAGGGAATTA
GAACGTTACA GGGCACTGGG GGTGGCTGAT GGCGTGCAAG GTAACGTATG GAATAACGCT
CATACGGCAG CCCTTGAGGA TTATAGAATT AACGAAAATC GTGATTTTCT TTACACCGAA
GCGGCTCAAT CGGCTGGTGA CAAACAAGAT CATGCTGACG CATTGAGAGG CCAATGA
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| Protein sequence | MPQNVITLPP TIVTPGQPLP RPLGPLSGAG VIARPLRWDG TIPANHELDA FFSKRGIRNE
QYTISIIVTA SSTQQNIHQS YIDFLPLLPA DVDAEISAGV GDYPFSELEK STIEKNVVDS
LISQRAAELA KSNEGAHAFF GRHVLAVDIK KNAVDFLNIF QTRRDLGSPL DVYKSWEASV
TAAYRAKILE EKIRMLTERS VSLSHTIAAA QAREDARIAA EAESTRLAVE AAEHARLAAE
TAEQARVAVE AEAKRVADEQ ALLAAEAEAR RVAAEAAEQA RMEAETQAQR DVDEHARVTA
EAQALEAGKT LRLPEAGTPQ LGAVAGVISV TAGSGLFLDA TIQAAIEILT ALAGTAVSST
TAVGIGTLLY SPSLGNGELP ERMLDLPARV LMPDLPDALN DVAATGGTVD MPYRIYGDQS
KYSVVATQAE GGFSPKVPVR ALILDPVANA YTFTTSDTPP ITLTFPIAAP GNSSTTTVAQ
PVEIPAYAGI TLEPIEVKAE PLPATGQMDI RDAIYVYPLN SGLPPVYAVF NSPYEGATTK
GEHSGRMYDP EKAGGPTQNL DWTTASVTQD GIDLVKLHTG RFGSSDANTI MIDRLEKILR
GELAVTDTDK RFYTHELREL ERYRALGVAD GVQGNVWNNA HTAALEDYRI NENRDFLYTE
AAQSAGDKQD HADALRGQ
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