Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0532 |
Symbol | |
ID | 3366008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 601182 |
End bp | 602138 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650872 |
Product | hypothetical protein |
Protein accession | YP_233640 |
Protein GI | 66043799 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTC TACTGCTGGT CCAGAAAGAG CAGCGTGCGA TTCTGGACCG TCTCTATGAC GGCATCGCCG CACATTGTGA ATGCGAAGTG CGCTGGCTGA GCTCTGCGGA GCAACGCAAC CTGCGTGGTT ATTTCCGCCG CGAGGTGGAC GTCAGCCGCT ATGACCGGAT CGTGTTTTTC CTGCGTTTCA AGCAGGAAGT GCGTCAGGTC GGGTTTATCC GCACGATTCC CAATCTGGTC ATCCTCGAAC ACGATGCCTA CCAGAACTAC ATTCCGTGCA AATACACCGG CAAGTTCAGC GCGCACTACC GCAAGCTGCC CTGGGCGCGG GTGATCTGTT CAGGGTTCAT GGTCAGCGAG CGCCTGCGCC AGGAAGGCTT CGACGCGGTG TTCGTGCCCA AGGGCTATGA CCAGAGCCTG CTGCAGTTGC AGGCACGCGA GCGTGACATC GAACTGGCCT TCGTGGGCAG CACCAACAGC GTCGCCTACA GCGGCCGCAA GGCGTTGCTG GACGAGTTGG GCCAGGTCGA GAACCTGCTC GTCACACGGA CCAAGTCCGG CGAAGAGTAT TGCGACACCC TGAACCGCAT CCGTTTTTTC GTCAGTGCCG ACGTGGGCAT GGGCGAATAC ATGATCAAGA ATTTCGAGGC CATGGCATGC GGCTGCGTGC TGCTTGCCTT CGATCAGGGC GCTGAAGAAA ACCGCGCGCT GGGCTTTGTC GACATGCACA ACATCGTGCT CTATCGCGAC ATTCCCGAGC TTCGCGAAAA GCTGGCGAAA TTGCGCGATA ACGTCACACT GGCCAGTGAA ATATCCTGTA ATGGGCAGAC TTTGGTCGAG GAACGCTTTA CATTCCATGC CCTTGGAAAA GCCATCGTGG ACGCCATGCA TGCGCCACTG CGCAGCATGC CGGCGGCGAG CTGGATCGAT CGCCTGCGGT CACAATTGGG ATGGTAA
|
Protein sequence | MKVLLLVQKE QRAILDRLYD GIAAHCECEV RWLSSAEQRN LRGYFRREVD VSRYDRIVFF LRFKQEVRQV GFIRTIPNLV ILEHDAYQNY IPCKYTGKFS AHYRKLPWAR VICSGFMVSE RLRQEGFDAV FVPKGYDQSL LQLQARERDI ELAFVGSTNS VAYSGRKALL DELGQVENLL VTRTKSGEEY CDTLNRIRFF VSADVGMGEY MIKNFEAMAC GCVLLAFDQG AEENRALGFV DMHNIVLYRD IPELREKLAK LRDNVTLASE ISCNGQTLVE ERFTFHALGK AIVDAMHAPL RSMPAASWID RLRSQLGW
|
| |