Gene Psyr_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0532 
Symbol 
ID3366008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp601182 
End bp602138 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID637650872 
Producthypothetical protein 
Protein accessionYP_233640 
Protein GI66043799 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC TACTGCTGGT CCAGAAAGAG CAGCGTGCGA TTCTGGACCG TCTCTATGAC 
GGCATCGCCG CACATTGTGA ATGCGAAGTG CGCTGGCTGA GCTCTGCGGA GCAACGCAAC
CTGCGTGGTT ATTTCCGCCG CGAGGTGGAC GTCAGCCGCT ATGACCGGAT CGTGTTTTTC
CTGCGTTTCA AGCAGGAAGT GCGTCAGGTC GGGTTTATCC GCACGATTCC CAATCTGGTC
ATCCTCGAAC ACGATGCCTA CCAGAACTAC ATTCCGTGCA AATACACCGG CAAGTTCAGC
GCGCACTACC GCAAGCTGCC CTGGGCGCGG GTGATCTGTT CAGGGTTCAT GGTCAGCGAG
CGCCTGCGCC AGGAAGGCTT CGACGCGGTG TTCGTGCCCA AGGGCTATGA CCAGAGCCTG
CTGCAGTTGC AGGCACGCGA GCGTGACATC GAACTGGCCT TCGTGGGCAG CACCAACAGC
GTCGCCTACA GCGGCCGCAA GGCGTTGCTG GACGAGTTGG GCCAGGTCGA GAACCTGCTC
GTCACACGGA CCAAGTCCGG CGAAGAGTAT TGCGACACCC TGAACCGCAT CCGTTTTTTC
GTCAGTGCCG ACGTGGGCAT GGGCGAATAC ATGATCAAGA ATTTCGAGGC CATGGCATGC
GGCTGCGTGC TGCTTGCCTT CGATCAGGGC GCTGAAGAAA ACCGCGCGCT GGGCTTTGTC
GACATGCACA ACATCGTGCT CTATCGCGAC ATTCCCGAGC TTCGCGAAAA GCTGGCGAAA
TTGCGCGATA ACGTCACACT GGCCAGTGAA ATATCCTGTA ATGGGCAGAC TTTGGTCGAG
GAACGCTTTA CATTCCATGC CCTTGGAAAA GCCATCGTGG ACGCCATGCA TGCGCCACTG
CGCAGCATGC CGGCGGCGAG CTGGATCGAT CGCCTGCGGT CACAATTGGG ATGGTAA
 
Protein sequence
MKVLLLVQKE QRAILDRLYD GIAAHCECEV RWLSSAEQRN LRGYFRREVD VSRYDRIVFF 
LRFKQEVRQV GFIRTIPNLV ILEHDAYQNY IPCKYTGKFS AHYRKLPWAR VICSGFMVSE
RLRQEGFDAV FVPKGYDQSL LQLQARERDI ELAFVGSTNS VAYSGRKALL DELGQVENLL
VTRTKSGEEY CDTLNRIRFF VSADVGMGEY MIKNFEAMAC GCVLLAFDQG AEENRALGFV
DMHNIVLYRD IPELREKLAK LRDNVTLASE ISCNGQTLVE ERFTFHALGK AIVDAMHAPL
RSMPAASWID RLRSQLGW