Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1568 |
Symbol | trpS |
ID | 3515532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1919952 |
End bp | 1921040 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670260 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_264850 |
Protein GI | 71066123 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0656784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.380715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA ACCAGATTTC TGACAGCCAA ACGAATATTA ATAGCTCAGC ACCAGCCAAA CGCATCCTCA CGGGTATCAA ACCTACTGGC ACCCTACATT TGGGTAATTA CGTTGGCGCG ATTCGTCCAG CGATTGAATC AATTAAAAAC AGTGATGATG AAGCATTCTT TTTTCTAGCG GATTATCATG GCATTATCGG CTGTTATGAC CCTGCTATTA TTCATGAATC TACCAAAGCC ATTGCGGCGA CTTGGATTGC TTGTGGTCTT GACCCTGAGC GTGTCACTTT TTACCGTCAA TCAGATGTGC CTGAAATCTT AGAGCTTGCC TGGATTCTAA ACTGCTCATG TGCAAAAGGT CTGATGAATC GAGCGCACGC TTATAAAGCG TCAGTCGATA TCAATATGGA AAAGGAAAAT GTCGATCCTG ATCAGGGTAT CAACATGGGG CTATTTGGCT ATCCGGTTCT GATGGCAGCA GATATCTTGA TGTTCAATGC CACGCATGTG CCTGTTGGTC GTGACCAAAT CCAGCATATT GAGATGGCAC GTGACATCGC AGGCACCTTT AATCATCGCT ATAAGACGCT GTTTACGCTG CCGTCTGCTG TGGTAGATGA CGATATTCCA CTACTCACAG GTCTTGATGG GCGTAAAATG AGTAAAAGTT ATAGTAATAC CATTCCCCTA TTTGGTGAGA TTAATCCACA AGTTAGCGGC GAAAAGCAGA TGCATAAAGC CATTATGAAA ATCGTCACCA ACTCGCAGTT ACCTGCTGAG CCAAAAGACT CTGATGATTC TGCTATTTTT GAGATTTATA AAGCCTTTGC AACGCCAGAA GAGATTGTCG ATATGCGTAG ACAGTTTGCT GCCGGTATTG GCTGGGGTGA TGCAAAGCAA GCCTTATTTG ACAAAATCAA TAATGAAGTT GCGCCGTTCC GCGCACGTTA TGAGGAACTG ATGGCCAACC CGAAAGAGCT AGAAGAAATC CTACAGATGG GTGCAGAAAA AGCTCGTCGT CATAGCCGTA AGCAATTAGA CAAAACTCGC CGTGCTATTG GTATTCGTCC ACTTGCTAAA CTTAAATAA
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Protein sequence | MSNNQISDSQ TNINSSAPAK RILTGIKPTG TLHLGNYVGA IRPAIESIKN SDDEAFFFLA DYHGIIGCYD PAIIHESTKA IAATWIACGL DPERVTFYRQ SDVPEILELA WILNCSCAKG LMNRAHAYKA SVDINMEKEN VDPDQGINMG LFGYPVLMAA DILMFNATHV PVGRDQIQHI EMARDIAGTF NHRYKTLFTL PSAVVDDDIP LLTGLDGRKM SKSYSNTIPL FGEINPQVSG EKQMHKAIMK IVTNSQLPAE PKDSDDSAIF EIYKAFATPE EIVDMRRQFA AGIGWGDAKQ ALFDKINNEV APFRARYEEL MANPKELEEI LQMGAEKARR HSRKQLDKTR RAIGIRPLAK LK
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