| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1416 |
|---|
| Symbol | |
|---|
| ID | 3515374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1714247 |
|---|
| End bp | 1715461 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637670103 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_264698 |
|---|
| Protein GI | 71065971 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.39768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAA CCTTTCATTT AAAGACTCTT TCGGTAGCTG TCGCTGCTCT TTCTGTTGCT
AGCCTCGCTA GTGCCGCCGG TCTTGATCGC TCTGGTCAAG ATATTACAGC ATTCTTACAA
GATGGCACCT ACGCTGAAGC GGTCTATACC TATATCGATG CAGACGTTAG TGGCTATGAT
AATGCGGATA CACCTCCACT TGGCACAGCT AATAGAGAAT ATGTGCGTGG TGACAACACA
GGTGATATTT CTGAGTCTTA TGATTTCTTC CGTTACGGTG TAAAAGCAGA CATTAATGAT
ACTTTTAGTG TCGGTGTTTT ATATGATGAG CCGTTCGGTG CAGCAGCCAA ATATAGTGGT
AATAATGATT TTGTAGATGA AAAAGGCGAA GGTACTAACG TAGAAGTTCG CACTAACAGT
ATTACCGCTA TCGTTGGTGC GAAGTTGGGT GCCACTAAAA ACTTCCAGGT ATACGGTGGT
CCAGTAGCAC AGCGTATTCA AGCGGATGTA AAACTGCGTG GTGAAGCTTA CAGTGTTGCT
AATGGCTATG ACGCGCATGT GAACCCTGAT CAAGATTATG GTTATATTGC TGGCGTTGCT
TATAGCAAGC CTGAAATTGC ACTAAAAGCA GCTTTAACCT ATCGCTCTGA GATTGAGCAC
AAAGCAGATA TATATGAGGA TTATCCAGCA ATAGGTCCTT TCCTTCGTAC CATGCAAAAT
AGTGAGATTG AGATTACTAC TCCTAAGTCA GTAAATTTTG ATTTCCAAAC GGGTGTTAAT
CCTACCACTT TAGCAACAGC TAAAGTACGT TGGGTACCAT GGAGTGACTT TGCAATCACC
CCACCGCTAT ATAATACGAG GGCTAAGCAG CTAGCTGGTC GTGATCTGAG TCTGGTCGAG
TATGATAAAG ACCAATGGCA AGTAGAGCTT GGTCTTGCTA AGCGATTAGC ACCAGCCTTA
GCGGTTAGTG GTACAGTTGG TTGGGACAGT GGTGCAGGTG ACCCAACGAC ATCACTCGGT
CCTGTCGATG GCTACTACAG TGTTGGTCTA GGTGCTAAAT ATAATCTTAC AGAGAACTGG
GCAGTATCAG CCGGTGGTAA ATACCTATGG TTCGGTGATG CTAAAGGTCA AATCCCAACA
GGTCAGATCG TTAGTGATTT CCAAGACAAT GATGGCTATG TCGCTGGTGT AAAAATATCT
TATCAAGCTA AATAA
|
|---|
| Protein sequence | MRATFHLKTL SVAVAALSVA SLASAAGLDR SGQDITAFLQ DGTYAEAVYT YIDADVSGYD
NADTPPLGTA NREYVRGDNT GDISESYDFF RYGVKADIND TFSVGVLYDE PFGAAAKYSG
NNDFVDEKGE GTNVEVRTNS ITAIVGAKLG ATKNFQVYGG PVAQRIQADV KLRGEAYSVA
NGYDAHVNPD QDYGYIAGVA YSKPEIALKA ALTYRSEIEH KADIYEDYPA IGPFLRTMQN
SEIEITTPKS VNFDFQTGVN PTTLATAKVR WVPWSDFAIT PPLYNTRAKQ LAGRDLSLVE
YDKDQWQVEL GLAKRLAPAL AVSGTVGWDS GAGDPTTSLG PVDGYYSVGL GAKYNLTENW
AVSAGGKYLW FGDAKGQIPT GQIVSDFQDN DGYVAGVKIS YQAK
|
|---|
| |