Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1414 |
Symbol | lysR |
ID | 3515372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1711249 |
End bp | 1712121 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670101 |
Product | LysR family transcriptional regulator |
Protein accession | YP_264696 |
Protein GI | 71065969 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.832122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA CAAATTTGAC GACATTCGTG ACCGTAATGA ATACAGGCAG TATTTCGGGT GCAGCAGAAA AACTGTTTAT CACTCAGCCT GCAGTCAGTA AACGCATCAA AAACCTAGAA GATGAGTTCA ACATCACTTT ATTTGATACA GTGGGTCGCG GTATTGTTCC AACCCAAGCC GCCAGTGAGA TGTTACCTCA TGCCAAACGC TGGCTTGAAG ACTACGAAAA CTTTAAAATC AACTTACAAC ACTCTAAGCA TATTGTATCG GGCAAGCTGG TCATTGGCAC CAGTCACCAT ATAGGGTTAC ACCATCTTGC CCCTGTGCTT AAGCATTTTA TTCAAGCCTA TCCTGCCGTA CAGTTAGAGG TGCATTTCGT CGATTCAGAG ACAGCACACA AAGCAGTACT CGATGGCGAC TTGTCTTTAG CCTTTTTGAC GCTGCCGCCT GTTTATGACA AGCGTCTGAC CTATCATACC CTATGGTCGG ATCCACTTTA CTTTATGACT GGCACCTTAT CGCCTTTGGC CAGCAAGTCG AATGTGACGC TAGAGCAATT GGCACGCTAC CCTGCTATCT TGCCATCTGC CAACACCTTT ACCAGTCAGA TTACCTTGGC TGAATTTGCC AAGCACAACC TAAAGCCTTA TGCCACCATG AGTACCAACC CGCTTGAATC TATTCGGATG CTGGTTTCTG TTGGGCTTGG TTGGTCAGTA TTGCCGCAAA CGATGATTAG TCAAGATTTA GAGTGTATTG ATATGGCAGA CAATATCGAA TTGCAGCGTC ATTTGGGTGT GGTAATTAAT CCAAAACTGA CCCAATCAAG CAGCGTCACT GCGCTATTAG ATTTGCTGGC ACCAATTGAG TAG
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Protein sequence | MNTTNLTTFV TVMNTGSISG AAEKLFITQP AVSKRIKNLE DEFNITLFDT VGRGIVPTQA ASEMLPHAKR WLEDYENFKI NLQHSKHIVS GKLVIGTSHH IGLHHLAPVL KHFIQAYPAV QLEVHFVDSE TAHKAVLDGD LSLAFLTLPP VYDKRLTYHT LWSDPLYFMT GTLSPLASKS NVTLEQLARY PAILPSANTF TSQITLAEFA KHNLKPYATM STNPLESIRM LVSVGLGWSV LPQTMISQDL ECIDMADNIE LQRHLGVVIN PKLTQSSSVT ALLDLLAPIE
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