| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1405 |
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| Symbol | |
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| ID | 3515363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1700490 |
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| End bp | 1702304 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637670092 |
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| Product | hypothetical protein |
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| Protein accession | YP_264687 |
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| Protein GI | 71065960 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0859572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTGTC ATTTATCTTA TCGCTTGACT AGCATGCATC GTGCAGTATC GATGGCATTG
TTTTATTCAA TAGGTTATGC AGCCTTAGTG TCTAACGCCC AAGCAGCAAC CATTGGCAAG
ACGGTCGTTA TTTCAGCTCA GCACGAACCT TTAGTTGCCA GTATTATGGT TACTGATATT
GAAAACACTG ATTTCTCAGC CAGTTTGGCA AATTCCGCTA TTTATCAGCA AATGGGGCTG
ACCCCAACTG ATTCCATGGT CGTACGCTTT CATCCGACTT CAGCTACGAG TGGTCAAGTT
TTTATCACCA CTACCAAGCC TGTGTCCAAA CCCTTTGCCG ATGTGGTTTT AGCGATTAAT
GATGGCAATC AGCGCAATAT TATTCCAAAG ACATTACTGA TGCTGCTTAA TGACAGCTTA
CCGATTGCCA CTTCTAAAAA CATCGTAACT GGCGCAAAGA AGCCTAACTT ACCCATGGTT
TCTACAACTA ACGCGCAGCC ATTGACGGTT AGGAAAGGCG CACCGCCACC TCTATTACCA
TCTAATTCAT CGACATCTAT ATTGAAGCCT GCAACATTAC CCGAACGTAA TGTCCAATCG
CCTAATATAA AAGTGCCTGT TATTCAAACG CCGAGTATCC AAGCCTCAAA TTCTCAAATA
CTGAGCGCTC AAGCAACGAC TATATCGTCT GACTCACCGA CAGCCGTTGC GACAACAACA
CAAAACAATA CCACAACCTA TATGCCTAGC CGCTTAGAAA ACGGTCGATT AAATAATCCT
ATTGATGTGA AAAACAATAG TGTAATGGTG AGCGCAAATA ATGATAATAA TACAGCTTTA
ACCGCCTCAT TAAAGAGTAC GCCTTCTGCT GCTAGCGAAA CTAATAAACA GTTCGATATC
TTAAACATAC AAATTACTCG TCAGATACAG CCGAAGAGTA AAAGTGATAC GGACATGATG
GTCGCTAGTC CTATGGCGCT CAAAACCCTG ACACCGAATG AAGCAGCTTT AAACAGTAAA
AATAAAGCTA TTGTCCCAAA TGATGGTAAT AGTATTGTCG CTACAACCCC TCTCAATAAT
GTACCACCTA ACTCGAATGC CTTGCAGCAA GCAGTAACGC CCAAGACGTC TATCGCAGCA
AAAAACACTT CAAGCCAAGT ATTGGCAGCA TCAGATAAGT CAGCTAGCAG CGAGATTAAT
TATACCGTGC AACGTAACGA CAGCTTGTGG GTTATTGCGC AGCAAATCGC AGAGAAAAAC
AATATCGACG TTCAAACCGT TATGAAAGAA ATTCAGACGC AAAATCCTGA TGCTTTTATC
AACAAAAACG CCAATCAATT AAAAGCAGAT GCGCAGTTAA GCCTGCCTAA TTATGATGCG
CTACCATCAC AGCAAAATCT TGAAGCTGCC ATCAGTGCTC AAAGACAATA TAGAGCCGCC
AATACGCCTG TCGCAAACAA ACAAACTGCT CTAAAACCCG TATCCAAATT CGACACTGCG
CAAGCAGCCA CACATACTAA AAAACCGGCG ACCACCAAGA CACAAATTTT GCCAAAGGCA
CAGTTTTCTG TCCTTGCTCC TGGTCATGAA GGCAGCGCAG ATGGTACTAA AACTAAAACA
GGCATGGCAA CGGGTAACGG ACTTAGCGCC GATGTGTTAA GCATGCTTAA ATCATCAAGA
CAAAGTACAG CATCACAAGC TCAGAAATTA TCAAAAATTA GTGGTACGCT TGATAGCTAT
ACTCACAAAT TACAATTACA AAACCAAAAA CTGGCTGAGC TGCAAGCTCG TCTCAAAAAA
TTACGCAATC AATAA
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| Protein sequence | MSCHLSYRLT SMHRAVSMAL FYSIGYAALV SNAQAATIGK TVVISAQHEP LVASIMVTDI
ENTDFSASLA NSAIYQQMGL TPTDSMVVRF HPTSATSGQV FITTTKPVSK PFADVVLAIN
DGNQRNIIPK TLLMLLNDSL PIATSKNIVT GAKKPNLPMV STTNAQPLTV RKGAPPPLLP
SNSSTSILKP ATLPERNVQS PNIKVPVIQT PSIQASNSQI LSAQATTISS DSPTAVATTT
QNNTTTYMPS RLENGRLNNP IDVKNNSVMV SANNDNNTAL TASLKSTPSA ASETNKQFDI
LNIQITRQIQ PKSKSDTDMM VASPMALKTL TPNEAALNSK NKAIVPNDGN SIVATTPLNN
VPPNSNALQQ AVTPKTSIAA KNTSSQVLAA SDKSASSEIN YTVQRNDSLW VIAQQIAEKN
NIDVQTVMKE IQTQNPDAFI NKNANQLKAD AQLSLPNYDA LPSQQNLEAA ISAQRQYRAA
NTPVANKQTA LKPVSKFDTA QAATHTKKPA TTKTQILPKA QFSVLAPGHE GSADGTKTKT
GMATGNGLSA DVLSMLKSSR QSTASQAQKL SKISGTLDSY THKLQLQNQK LAELQARLKK
LRNQ
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