Gene Psyc_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1239 
Symbol 
ID3515196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1487124 
End bp1488011 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content45% 
IMG OID637669927 
ProductAEC family transporter 
Protein accessionYP_264523 
Protein GI71065796 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.55367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.862365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC GGGGTGAGGC GGATCAGGTG TTTGTCGATC AGGCCTCTAG TTTCGTTTTT 
AACTACTGTT TGCCATGTCT GCTATTTTTT AGTGTGGTCG ATAGTGATGT TGATTATGCG
AAGCAAGTGG TATTGATAGT CGCTGGTATT GTGGTGACCT TTATTTTGTT TATTGGCTCT
GAGCTCTATG CCAAGCATTT TATCAGTGAC CCTGCTAATC AAGGAGTTTT TGTACAAGGT
ATTTTTCGCA GCAATATGGC GATTATTGGA CTTGCGACCG TTGCTAACGC TTATGGTACG
AGCGGCTTGA GTATTGGCGC GGTATACATG GGCGTGGTCA CGATACTGTT CAATATCCTA
GCGGTGATTA CGCTAAGCCG AGTATCTAAA AGTTCGGAAG ATACTTGGCT CAGTCGTAGT
ACCATGATTA TCAAAAAGCT ATTCACAAAT CCGCTTATCA TTGCGCTCGT CGCAGCATTT
ACCTATAAAG CGTTGCCACT ACCACCGCTT GCAGGTGTGA TTCATATCAC CGGTGGGTTA
TTGGCAGCAG TTGCTTTACC GCTTGCACTG ATTTGTGCAG GTGCCAGTAT TAATTTGAAG
TCGATGTTGC ATCCTTCTGG ACTTTCTATG CAGGCAAGCA TTGGACGCAT TGTTATTGCA
CCATTGGTCG CTATAGCGGT TGGTTTTGCT TTTGGCTTAA CGGGTGTACA TATGGGCGTA
CTGTTTTTGA TGGTTGCGTC GCCAACGGCA GCCGCAAGCT ATGTGATGGC AAAAGCGATG
GGTGGTAATG ATATTTTAGC GGCCAATATT TTGGCATTTA CCACGGTGGT TGGTATGTTT
GGTATGGCGA TTGGCGCCGC GATATTGCGC GCTATGGGGT TGATTTAA
 
Protein sequence
MKRRGEADQV FVDQASSFVF NYCLPCLLFF SVVDSDVDYA KQVVLIVAGI VVTFILFIGS 
ELYAKHFISD PANQGVFVQG IFRSNMAIIG LATVANAYGT SGLSIGAVYM GVVTILFNIL
AVITLSRVSK SSEDTWLSRS TMIIKKLFTN PLIIALVAAF TYKALPLPPL AGVIHITGGL
LAAVALPLAL ICAGASINLK SMLHPSGLSM QASIGRIVIA PLVAIAVGFA FGLTGVHMGV
LFLMVASPTA AASYVMAKAM GGNDILAANI LAFTTVVGMF GMAIGAAILR AMGLI