Gene Psyc_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1230 
Symbol 
ID3515187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1474615 
End bp1475103 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID637669918 
ProductAsnC family transcriptional regulator 
Protein accessionYP_264514 
Protein GI71065787 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.261915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATA CTCATTCTAA TTATCTATTA GCTGCAGATA TTGATGACAC TGATAAACGA 
CTATTACGCT TATTGCAGAC CGATGCTCGT ATGAGTATTA CTGAGCTTGC TGAGCGTGTT
AATCTGTCGG CAACCCCTTG CGCGCGCCGT GTTAAACGTT TAGAAGATAG GGGTATTATC
ACCGGTTATC ATACCCAAAC CGATGTCCAA AAACTTGGCT ATCCCTTGGC AGTGTTTATT
GCTATCAGTA TGGACCGTCA CACGGCTGAC CGTTTTGAGC AGTTTGAGCG GAAGGTTAAA
AGCTTTGATG AAGTCATCAG CTGCAGTATC GTCACTGGTC GCACGGAGGA TTATTTAATT
AAAGTACGCG TACGTGACAT GGCACACTAT GAGGAGTTTT TATTACATAG GTTAAATCGT
ATCGAAGGCG TGGCACAAGT CCATACCAGC TTTGAGCTGC GAGAAGTATT TAGCCGAAGT
ATGGTGTAA
 
Protein sequence
MQHTHSNYLL AADIDDTDKR LLRLLQTDAR MSITELAERV NLSATPCARR VKRLEDRGII 
TGYHTQTDVQ KLGYPLAVFI AISMDRHTAD RFEQFERKVK SFDEVISCSI VTGRTEDYLI
KVRVRDMAHY EEFLLHRLNR IEGVAQVHTS FELREVFSRS MV