Gene Psyc_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0430 
SymbolphrB 
ID3514228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp538822 
End bp540447 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content44% 
IMG OID637669116 
Productdeoxyribodipyrimidine photo-lyase type I 
Protein accessionYP_263727 
Protein GI71065000 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA CGGCAGCAGC AATAGAAAAT AATGCTAACA ACAATGATGG GAATAATCAC 
CAGCCCCACT ACCTTATGTG GTTTCGCCGC GACCTGCGTG TTCATGATAA TACTGCTTTG
GCCGCCATTT GTGAGCGCGC AAACACAGAC AACGCTAAGC TCAGCGCGGT GTTTTTTCTC
ACCCCTGAAC AATGGCAAAC ACATGATATG TCGCTTACAC AGCTTGACCA TATCGCCCGC
ACCTTACCTA TCCTCGCACA AAAACTACAA GCATTGAATA TCACCTTAAC CGTGCAAATT
TGCCCTAGTT TTACTGATTG TATAGCTGCG TTGAGCGCAT TATGTGAGTC AAATAATATC
AGCTGCGTGA TGGCAAATCA TGAGTACGAA GGTAATGAGA TTGCGCGTGA CGAGCAATTA
ACCAAACAGC TGGCAAAAAC TGATATTGAG TTTATCCGCT GGCATGACCA ATGTATCTTA
CCACCACAAA CCATCACTAC CAATGACAAT AGCATGTATC AAGTGTTTAC CCCATTTTAT
AAAAAATGGC GGCATACCTT GGAGGTCGGT GATATACAAA TCCATACAGC ACCTGCCATC
ACGAATAATG AACAAATTAA TTTAATATCA TCAGAATTCA GTGCAAATAC TATTCAGGCT
ATAGAGGCAT TGTGCAAAGA AACTGTCCAC GACTATCAAC AATATCTACA GACTCATGAA
TGCTATCAAT ATATAGATAC GGATAAGCAA ATTAGCCAAG CTCGCACTGC CTATCCTGCT
GGAGAAGCCG AAGCCTGTCA TCGATTAACT CAATTTATCT CTGATGATAT TAATCACTAC
GATGTGAGCC GCGATGTACC CAGCTTGCAT GCCACCAGTC ATTTATCAGC CTATCTTACT
ATTGGCGCTC TTAGTCCCAG ACTCTGCTAC TTACAAGCTA CTAAGGCGCT AGGGGAATTA
CATAGAAATG ACGGTGACAA CTTTGACAGC GGTGATAATA ACGACATCAA TCGCTGGATA
AGCGAGCTTG CTTGGCGCGA TTTTTATCGT CACGTTTTAG ACTATAAGCC TGAGCTTATC
CGCCATCAGG CTTATAAACA TGAGACTGAT AAGAAGATTA ACTGGTCGTA TGATGAAGAT
GCTTTTGCAG CATGGCGTGA GGGCAAAACG GGTGTGCCAT TAGTCGATGC GGCAATGCGC
TGTCTGAACG CGACGGGCTT TATGCACAAT CGCTTGCGCA TGGTCACGGC GATGTTTTTG
ACCAAAGACT TATTGATTGA TTGGCGCTGG GGTGAGCGTT ACTTTATGCA GCAGCTGATA
GATGGTGACT TTGCGTCTAA TAATGGCGGC TGGCAGTGGA GCGCGTCAAC AGGTACAGAT
TCTGCGCCCT ATTTTCGTAT TATGAATCCT TTTAGCCAAG CCAAAACCCA TGATTCTGAT
GGAATATTTC TTAAGACTTG GCTACCTGAA TTAGAACCGA TTCCTGCCAG CATCTTGCAT
AGCGAAGATA AAATGCGCAA GGCACTGAGT AAAAACGGTG CCTTTGCAGA CATTGATTAT
CCTATCCCCA TGGTCGAGCA TAAACTGGCA CGCCAATTAG CGATTGCTGA ATTTAAAAAA
GAGTAG
 
Protein sequence
MSKTAAAIEN NANNNDGNNH QPHYLMWFRR DLRVHDNTAL AAICERANTD NAKLSAVFFL 
TPEQWQTHDM SLTQLDHIAR TLPILAQKLQ ALNITLTVQI CPSFTDCIAA LSALCESNNI
SCVMANHEYE GNEIARDEQL TKQLAKTDIE FIRWHDQCIL PPQTITTNDN SMYQVFTPFY
KKWRHTLEVG DIQIHTAPAI TNNEQINLIS SEFSANTIQA IEALCKETVH DYQQYLQTHE
CYQYIDTDKQ ISQARTAYPA GEAEACHRLT QFISDDINHY DVSRDVPSLH ATSHLSAYLT
IGALSPRLCY LQATKALGEL HRNDGDNFDS GDNNDINRWI SELAWRDFYR HVLDYKPELI
RHQAYKHETD KKINWSYDED AFAAWREGKT GVPLVDAAMR CLNATGFMHN RLRMVTAMFL
TKDLLIDWRW GERYFMQQLI DGDFASNNGG WQWSASTGTD SAPYFRIMNP FSQAKTHDSD
GIFLKTWLPE LEPIPASILH SEDKMRKALS KNGAFADIDY PIPMVEHKLA RQLAIAEFKK
E