Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0392 |
Symbol | |
ID | 3513996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 490541 |
End bp | 492499 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669082 |
Product | nucleotidyltransferase |
Protein accession | YP_263694 |
Protein GI | 71064967 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00832974 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCCATC TTGATTTTAC CCAGCCACCA TTTGACGTTT TAAGCGCCGC TGAACGCCAA AGTATCAAAA AAAACACCCA AGTTCGTTAT CTTGCCAAAG ATGAGACATT ATCGACGGAT GATTTGCAGT ACTTTTATGT GGTACTTAAA GGTCATGTCG AGCAGCTGCT TGACGGTACC TTTGTCACCT CCTATTTAGG TAGCAACCAT ACCGATCATC TCAATAATAA CGATTGGTTT GATAGCCGCC GTCTGCCAAA ACCCATGATA GAAGATGGGT TGCAAGAAAG CGATCTTCAA AAAGATACAG ATATAAACGA ATTAATAATG CCTTATCAAT TTCGTGCGGT CGAAGATACT TTGCTGCTGC AAGTAAATGG GACAGCCATT GATAAAATCA GTGCGCAAAA CTATTTAGTT CGTCAATTAG TATCAGAAAA CCTGCCCGAA CGTTTAAAAG CTTTACAGCT ACGGCGTAGT GGACAGCATT TAGATGCTGC CAGTTATGAC GACCAACAAG AAGTGCAGCA GATTATGCTA CAGCCAGTAA TTGATATCAC TTTATTGCCC GTACATATCG TTGGCGCAGA TGACAACTTA TATCAAGCAG CTCGCACCAT GACTGAGGCT GGGCTTAAAC ATGTTTTGGT ACGTCCAACA GGGTATTTAC AAGATAAAGA TAGCTTTGAT CGTACTTTAG GCATTCTCAC TGATAACGAT ATCTGCCGTG CTGTGAGCGA TCAAAAAAAT CCTGCTACGA CCCCTTGTCA AGGCTATGCA AGTTTTCATC TGCGAACCAT CGATGCTGAT GATGATATTG GCGATGCGCT ATTGACGATG ACGCGCTACC GTATCCATAG GCTGCCAGTG ATAGATGCTA ATGGTAAGGT CATAGGCGTA CTTGGGCAAA GCGATATGCT CGCTCATATT GGTCATCACT CTCAGCTGAT TAGTATTCAA ATCGAACAAG CGACAGATTT GCCAAGCTTG GCGACCGCAG TTGAGCTCAT TGGACGCTAT ATACGCGCTC AATATCAAAA TGGTATCAAA ATGGGCAACG TCAGCCGCAT GGTACAGACC CTTAACGCGC AAGTATTTAC CAAGCTTTGG CAACTTATCG TCCCTGATGA AGTAATGGAA AATACCTGTG TCATCGTTAT GGGTTCAGAG GGTCGCGGCG AGCAAATCAT GCGTACTGAC CAAGACAATG CGCTTATCAT CCGTGATGGT TTTACCCACC CTGAGCTTGC CCGATTTGCC GAAACCTTTA ACCAGCACTT AGCAAATCTT GGCTATCCGC TGTGTGAAGG TAATATCATG ATGACCAATC CCATGTGGCG GCAACCCTTA AAGCCGTTTA AAGCACAGAT TAGTGCATGG TATAAAAATA CCGACCCGAT ACACAGTATT TATTTATCCG CCATATTTGA TGGGGAGTAC GTCTGCGGTG ATGAATCGCT ACTGATTCAG ATTCGTGAAC ATCTAAAAAC TGCCCATCGG CAGTCAGACT TGATGTTCGT GCGCCAATTT GCACGAGCAG CGCTACAGTT TGGCGATATC AATCAATGGT GGCAAAAGCT AGTACCGTTA TTGGGTGGCA AACCTATCTC TTATACTATT GACCTAAAAA AAGCGGGTAT CTTTCCATTG GTACATGGCA TCCGTACCTT GGCGTTAGAA AACGATATCT TTACCGACCC TAGCAGCAAA GGTCGCCTCA AAGCTTTGGT TCAAGCTCGG GCGTTAACCC AAGAGCGTGC CGACACTTTA CTTGAGGCGT TAGAGTTTTT TATGGCACAG CGCTTATCAG TCGCGCTATC GACAGACAAC AAGCATGCGC AAGAAGTGGA TCCACGGACG TTGTCGGCAC TAGAGCGTGA TTTATTAAAA GAGTGCCTAG CCGTAGTAAA AAGCTTCAAG GGACAATTAA GTCGACAGTA TCAGCTTGAG ATTGGTTAG
|
Protein sequence | MPHLDFTQPP FDVLSAAERQ SIKKNTQVRY LAKDETLSTD DLQYFYVVLK GHVEQLLDGT FVTSYLGSNH TDHLNNNDWF DSRRLPKPMI EDGLQESDLQ KDTDINELIM PYQFRAVEDT LLLQVNGTAI DKISAQNYLV RQLVSENLPE RLKALQLRRS GQHLDAASYD DQQEVQQIML QPVIDITLLP VHIVGADDNL YQAARTMTEA GLKHVLVRPT GYLQDKDSFD RTLGILTDND ICRAVSDQKN PATTPCQGYA SFHLRTIDAD DDIGDALLTM TRYRIHRLPV IDANGKVIGV LGQSDMLAHI GHHSQLISIQ IEQATDLPSL ATAVELIGRY IRAQYQNGIK MGNVSRMVQT LNAQVFTKLW QLIVPDEVME NTCVIVMGSE GRGEQIMRTD QDNALIIRDG FTHPELARFA ETFNQHLANL GYPLCEGNIM MTNPMWRQPL KPFKAQISAW YKNTDPIHSI YLSAIFDGEY VCGDESLLIQ IREHLKTAHR QSDLMFVRQF ARAALQFGDI NQWWQKLVPL LGGKPISYTI DLKKAGIFPL VHGIRTLALE NDIFTDPSSK GRLKALVQAR ALTQERADTL LEALEFFMAQ RLSVALSTDN KHAQEVDPRT LSALERDLLK ECLAVVKSFK GQLSRQYQLE IG
|
| |