Gene Psyc_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0292 
Symbol 
ID3515096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp357728 
End bp358471 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content44% 
IMG OID637668979 
Productguanine-specific ribonuclease 
Protein accessionYP_263596 
Protein GI71064869 
COG category[F] Nucleotide transport and metabolism
[K] Transcription 
COG ID[COG1278] Cold shock proteins
[COG4290] Guanyl-specific ribonuclease Sa 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.135359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTG GCAAAATTAA GCACTGGAAT TCCGATAAAG GCTATGGCTT TATCGACGTC 
GACAATCAAA GTGAAGACGT TTTTTTTCAT ATAAAATCAG TGCAAATGGC GCAGCCTATT
AGCGAAGGGC AACGCGTCTA TTTCAATAGT GAGCGCAATG ACAAAAACCA GTTGCGCGCC
ACCGAAGTCA CATCGGATGA ATTGAGCATT TTAGAAACTT CAGTAGAAAA TCCAGCTCAT
CGCAGCTCAG TTAATCATAA TCAAAAAAAC AACCGAAACC ATACTCGTAA AAATAATCGT
GGAAGCCAAA ACAAGAAAAG TAGCCTCTCT ACCCTATTCA GCTTGATTGC CATTATCGCT
GTTGCGGTTT ACTTCTTTGC TGATATAAAA TCCAGCTTTT TTGCAGATAG CACGCCACCA
GCTACCCTAA CGCAAAACTC CATTGAAACC GCTAGCACCG CAAATGCAGT GGCTATCACT
GGTGATGCGC AGATAGATCA AACCATTGCG CTTATTCAGC AAGGCGGTCC TTTTTCTTAC
CCTAACAAAG ATGGCACCAA GTTTTATAAT CGAGAAGGCA AGCTACCGGC GGAGTCGCAA
GGTTACTATC GTGAATATAC TGTACCCACG CCTACGGTTT CTCATCGCGG TGCACGGCGT
ATTGTTACTG GTGGTCACCC ACCCACCATC TATTACTTGA CCCTTGATCA TTACGACAGC
TTTCAAAAAC TGGAGGTGAA ATAA
 
Protein sequence
MQSGKIKHWN SDKGYGFIDV DNQSEDVFFH IKSVQMAQPI SEGQRVYFNS ERNDKNQLRA 
TEVTSDELSI LETSVENPAH RSSVNHNQKN NRNHTRKNNR GSQNKKSSLS TLFSLIAIIA
VAVYFFADIK SSFFADSTPP ATLTQNSIET ASTANAVAIT GDAQIDQTIA LIQQGGPFSY
PNKDGTKFYN REGKLPAESQ GYYREYTVPT PTVSHRGARR IVTGGHPPTI YYLTLDHYDS
FQKLEVK