Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0292 |
Symbol | |
ID | 3515096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 357728 |
End bp | 358471 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668979 |
Product | guanine-specific ribonuclease |
Protein accession | YP_263596 |
Protein GI | 71064869 |
COG category | [F] Nucleotide transport and metabolism [K] Transcription |
COG ID | [COG1278] Cold shock proteins [COG4290] Guanyl-specific ribonuclease Sa |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.135359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGTG GCAAAATTAA GCACTGGAAT TCCGATAAAG GCTATGGCTT TATCGACGTC GACAATCAAA GTGAAGACGT TTTTTTTCAT ATAAAATCAG TGCAAATGGC GCAGCCTATT AGCGAAGGGC AACGCGTCTA TTTCAATAGT GAGCGCAATG ACAAAAACCA GTTGCGCGCC ACCGAAGTCA CATCGGATGA ATTGAGCATT TTAGAAACTT CAGTAGAAAA TCCAGCTCAT CGCAGCTCAG TTAATCATAA TCAAAAAAAC AACCGAAACC ATACTCGTAA AAATAATCGT GGAAGCCAAA ACAAGAAAAG TAGCCTCTCT ACCCTATTCA GCTTGATTGC CATTATCGCT GTTGCGGTTT ACTTCTTTGC TGATATAAAA TCCAGCTTTT TTGCAGATAG CACGCCACCA GCTACCCTAA CGCAAAACTC CATTGAAACC GCTAGCACCG CAAATGCAGT GGCTATCACT GGTGATGCGC AGATAGATCA AACCATTGCG CTTATTCAGC AAGGCGGTCC TTTTTCTTAC CCTAACAAAG ATGGCACCAA GTTTTATAAT CGAGAAGGCA AGCTACCGGC GGAGTCGCAA GGTTACTATC GTGAATATAC TGTACCCACG CCTACGGTTT CTCATCGCGG TGCACGGCGT ATTGTTACTG GTGGTCACCC ACCCACCATC TATTACTTGA CCCTTGATCA TTACGACAGC TTTCAAAAAC TGGAGGTGAA ATAA
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Protein sequence | MQSGKIKHWN SDKGYGFIDV DNQSEDVFFH IKSVQMAQPI SEGQRVYFNS ERNDKNQLRA TEVTSDELSI LETSVENPAH RSSVNHNQKN NRNHTRKNNR GSQNKKSSLS TLFSLIAIIA VAVYFFADIK SSFFADSTPP ATLTQNSIET ASTANAVAIT GDAQIDQTIA LIQQGGPFSY PNKDGTKFYN REGKLPAESQ GYYREYTVPT PTVSHRGARR IVTGGHPPTI YYLTLDHYDS FQKLEVK
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