| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0237 |
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| Symbol | |
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| ID | 3515080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 281921 |
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| End bp | 285676 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637668925 |
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| Product | pilus assembly protein tip-associated adhesin PilY1 |
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| Protein accession | YP_263542 |
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| Protein GI | 71064815 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACC TCTATAACAA AAACTCAGCC AGACAACCAT GGCCTACCAA ATCCTTAACA
ATTGCTGTGC TCCTCAGTTT GACTGCTATG GTCTCGCAAA CGGCGGGTAG TGTCGAAAGA
TTGCCTATTG GTGACTTGGA AATTTACCAG TCTGCAAAAG GTACTGGTGC TAGTATCTTT
ATGATGATTG ATGTCTCAGC AAGTATGAGG CAGTCAAGTA TCCTAGCAGA TTATGGTCAC
CCATGCGATG AAGGTGTAGG AAAGAGCTAT GGTCCTCGAG AAGATGAGAG TATCTTCGCG
ATTGTTGGAA ATGTAGAGGT TTATTTTACG CCCAAGGGCT GTGAGACTAC GCAGGGAGGA
GGAACATCGA ATCCTAAAGA GTTTGATAGA TTGTCACGTC TACAAATGGC GCTGATAGAA
TTATTAGCTG ACCAAGTACG GAACAAAACG GGTAATGAAT TCAGAACAGG TATAGGCTCA
ATACCGAACG AATATGCGAT CGGAGTTGGT ATATTTGGCT ATAATGGCAC AAAGGCCAAG
ATTGTAGCGC CATTAGGTCA GTTAACACCA GATAGGCGTA TAGAAATAAT CAAAGTAATC
GCAGGCTTAA GTGTAGCATC TGGCGATGGC AAACCGACAG CACATGGGTT GGCTGAGGCT
GGCGCTTATA TGATGGGCAC CACCACTAAA ACAGATAATT ATGCTGTTCA CAGCGGCTTT
GATGAATCTG TTAGCACTTC AAAGAATAGT GCCTCATATA TTTCACCCTT AGAGCTCAAA
CAATGTAGCG GTAACGGTAT CTATCTATTG ACCGATGGTG TCCCGAGCGG CTCATCAGTT
GAGATAGCAC AAGGCTTGAT GAATAAATCT TTACAGGGCA GCTCATTGTC TGTCAATAGC
TGTAACGGAC TATCAGGTGG TACTGGTACT GGTGATGGTA CATGGGGCTG TATGGCTGAG
TATACTCAAA AACTACGAGA CCCTACCAAC CCACGTCTGC TCCCCATCAA GACCGCAACG
GCAGGCTTTG GAGATAACTT TAAAGGGTTA ACCACTACCC GTAAGATAAC GGTTGGTGGT
AAGCAAGTAG AAGCTGTAGA TTGTTCACAA GGCGCGGCAA CCGAGGTAAC CGATGATGCT
CGCAATCTGT GTAAGCTAGG TCAACGCTAT GGTGATAACG AGTTATCTAC TAATACCAGT
GTATTTGGTA ATGGCGGTTT TTATTACATT GCAGGAGAGC AAGGTAAGTC TAATGTCACT
ACCGAAGAGC TGAAGAGCTC TAAAATCATT GAAAATAGCA TAGTGGATTT TGCGTCGACC
TTGACACAGG TAATTACTAC ATCACCATCC GGAACAATTA GCATTCCTGA TGATCCTTAT
CGCGCGTCAA ATCAGCTGCC CTATGCGTAC CTGCCGATGC TAAGTCCTGA CATTGCTTCA
TCAGCCAGTA TCTGGAAGGG CAACCTAAAG AAATACCATT TGGATGCTGG AACCTTATAT
GGCAAAAGCG ATCAGCTACT CTACAAAAAT GCTGCAGGGC AACTGAATGA GACCACTCAA
GACCTCTGGC AGTTGACTGA CTTTACCCCA GTAGGTACTA CAACGGTTGA CAATAGTAGT
ATAGAGGCAG GCGGCGTTTA TGCGCAATTG CGTACCCCAA TGTCAGGTCT AGCCAGCGTA
CGTACCCTGT ATGTTGAAGA CGTCACCTCG GCGACGGATA GCAAGCCAAT TCTACGTAAG
CTAAGTGTGA ACGCCTCTGG TAAACCGGTG GGCTTTAGTA GTTTGGTAGA TTCTTTGTAT
ACCAAGGACA ACGAATTAAA CAAACGCCGT TTGCTGAGCT TCTTAGGCTT TGATAACTTG
ATCAACATTA ATGGATTGGC AACATCCAGA ACAGCAGTTG AAAGTTTAAC ACTGACTCAA
CCCGTTCAGA TAACCAGAGT CTTAGGCGGC GTCGTCCACT CCAAACCTAC GGCAATCTCC
TATAGCTCAA CGTTGAATGA CAATGGTAGT ATTATCGATC CTCGTGATGA CTACGCATTA
TTTGGCTCGA TGGATGGCGC CTTGCATCTG GTCGATGCTG ATGATGGCAA GGAAGAGTTT
GCTATTGTCC CCAAAGCTAT GTTAGCGGCA CAGCCAGAGG CTCTGGTTAA TGGTTCAAAG
AAAAATCAAA TTGGTCAGCC CTACTTCGGT GTCGACGCCC CATGGTTGGT GACCACTGAT
TATACCTATG ATCTAGCTGC CAAAAAGGCT ACATTGGATA CCGCAAATAG CAAAGGTATG
TTTGCTTATG GTGGTCTGCG TATGGGCGGA TCAGCTTTTT ATGGTATGAA TATCACTGAC
AAAACTGCAC CCAAAATATT GTTTACGATT ACTCCAGCGA CCATAGGTTT TAGTCGAATG
GGTCAAATTT GGAGCAAGCC AACTGCGGCT AAAATTCGTA TGACTAAAGA CGCCGATCCA
GTTGATGTAC TGGTATTTGG TGGCGGCTAT GATATGGCTT ATGAAGATGA TGAGTATGTG
GCCACCGCCG CAGCGCCAGC CACCGCCACA GCGCCAGCTA CCGCGGCAGC GCCAGCTAAA
GGTAATGCCA TCTATATCAT CAATGCCAAA ACAGGGGCGC TGATATGGTC GACTAGCTAT
AACTTGACTA ACAATAGTAA TATGATTCAC AGCATAGTCG GCGGTATCAC CGTCCTTGAT
CGTGACAATG ATGGTCTGAT GGATCATCTC TACGCCGCTG ATCTCGGCGG GCAAGTCTTC
CGCGCTGATT TTGAAAACGC CCGTCCTGCC AAGTTTGGTT TTAGTGAGGT AACTGGCTTT
TCAAGTAAGC GCGTCATACG GATACTCAAT ACTACGCCTA GTGCTGCTGC TGACAGCAAA
TACACTTATC GCTTTTACGA GCGCCCGGTT GTGAGCTTCT ACCGTAATGA GGGTGGTCCT
AACAATGGTA AAATATTTGC TTTGGTCAAT GTCATATCGG GTAACCGTAG TGTACCGCTA
TCGACTTTAC GTGATGGCAA TACCTATGCC AACCGCGTTT ATGGCATTAT TGATAGTGAT
GTGACTAAAG CCAGCCTATA TGATGCTACG CCAACGCTAA ACGTTACAAA CTTAACAGAA
AGCAATCTGG TCAACTTAGC GACTACCCTT GGTGCAACGC CAACAGAAGC TATAAAGAAA
ACTGCTAAAG CAGAGATGAT CGCCGGCACT AAGCAAGGCT GGTACTATCC ATTGACGCGC
TTCGATGGCT TTAATAATGT CAGATACAAC AAGGGCATTG GTGATAGTGT GGTGATCAAT
GACCTACTAT ATACCACGGT TTATAATCCT GACAAACAGT ATTATGAGGT AAATAACTGT
ACGGCTCGGA TTTCCGGTGG CTCAGAACGA CAGCTTTATT GTCTCCCATA TGGTATCTGC
ATGGATGCTA ACTCAGTATC AGGTACAGGG GGTTATATCC CTGCTGGTGA AGGGATTAAA
GAGCTGACCT TAGGCGCTTA TAATAAAAAT AACACCAACT TAAGGGTGCT TATCGGTACG
ACCACCATCA CTGATCGTAT TAATGCCACT ACACGCTCTG GCTACGGTAT TGATCCTAAT
AAAGACGGTA GCAATATCAA AGGTATTGTC TATGCAGATC AAGGAAAACC TACCCAAGGT
GATACTAATA GTATCGGTGA TGGCAGCGCA CCTGAATATC TGTTCAACGA GCGCTATACG
CTACAGCCCA GAGCATGGTA TGAGCGCGCG CAATAA
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| Protein sequence | MKYLYNKNSA RQPWPTKSLT IAVLLSLTAM VSQTAGSVER LPIGDLEIYQ SAKGTGASIF
MMIDVSASMR QSSILADYGH PCDEGVGKSY GPREDESIFA IVGNVEVYFT PKGCETTQGG
GTSNPKEFDR LSRLQMALIE LLADQVRNKT GNEFRTGIGS IPNEYAIGVG IFGYNGTKAK
IVAPLGQLTP DRRIEIIKVI AGLSVASGDG KPTAHGLAEA GAYMMGTTTK TDNYAVHSGF
DESVSTSKNS ASYISPLELK QCSGNGIYLL TDGVPSGSSV EIAQGLMNKS LQGSSLSVNS
CNGLSGGTGT GDGTWGCMAE YTQKLRDPTN PRLLPIKTAT AGFGDNFKGL TTTRKITVGG
KQVEAVDCSQ GAATEVTDDA RNLCKLGQRY GDNELSTNTS VFGNGGFYYI AGEQGKSNVT
TEELKSSKII ENSIVDFAST LTQVITTSPS GTISIPDDPY RASNQLPYAY LPMLSPDIAS
SASIWKGNLK KYHLDAGTLY GKSDQLLYKN AAGQLNETTQ DLWQLTDFTP VGTTTVDNSS
IEAGGVYAQL RTPMSGLASV RTLYVEDVTS ATDSKPILRK LSVNASGKPV GFSSLVDSLY
TKDNELNKRR LLSFLGFDNL ININGLATSR TAVESLTLTQ PVQITRVLGG VVHSKPTAIS
YSSTLNDNGS IIDPRDDYAL FGSMDGALHL VDADDGKEEF AIVPKAMLAA QPEALVNGSK
KNQIGQPYFG VDAPWLVTTD YTYDLAAKKA TLDTANSKGM FAYGGLRMGG SAFYGMNITD
KTAPKILFTI TPATIGFSRM GQIWSKPTAA KIRMTKDADP VDVLVFGGGY DMAYEDDEYV
ATAAAPATAT APATAAAPAK GNAIYIINAK TGALIWSTSY NLTNNSNMIH SIVGGITVLD
RDNDGLMDHL YAADLGGQVF RADFENARPA KFGFSEVTGF SSKRVIRILN TTPSAAADSK
YTYRFYERPV VSFYRNEGGP NNGKIFALVN VISGNRSVPL STLRDGNTYA NRVYGIIDSD
VTKASLYDAT PTLNVTNLTE SNLVNLATTL GATPTEAIKK TAKAEMIAGT KQGWYYPLTR
FDGFNNVRYN KGIGDSVVIN DLLYTTVYNP DKQYYEVNNC TARISGGSER QLYCLPYGIC
MDANSVSGTG GYIPAGEGIK ELTLGAYNKN NTNLRVLIGT TTITDRINAT TRSGYGIDPN
KDGSNIKGIV YADQGKPTQG DTNSIGDGSA PEYLFNERYT LQPRAWYERA Q
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