| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2019 |
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| Symbol | |
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| ID | 5206595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2515587 |
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| End bp | 2515979 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640600251 |
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| Product | Tfp pilus assembly protein PilE-like protein |
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| Protein accession | YP_001280909 |
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| Protein GI | 148653816 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCAC AGCAAGGATT TACTTTAATT GAGCTGATGA TAGTGGTGGC CATCATCGGC
GTGTTGTCTT TAATTGCCAT TCCTGGCTAT CAAAGCTATG CCCAAAAGAC CTCTGAAGCT
GCCTGTTTGT CACAGACCAA GGCGTTTAGT AATCAGATAT TTTTAGAGCG TAATGATCCT
ACGAATGAGT TTGATGCTGA TAAAGCGACC CGCATATTGA ATACAGCGAG TGATAAAACA
GCTTGCGAGA CTATGGTTTA TAACGATGGC ACGAGTGTAA CGCCGGCAGT GATGCCAAGC
GTGCAATCAA AAATTAAAAA CCCAGGCTCT GATCACACCC ATATTATCTG TAATTTAGAT
AAGAGCGTAC AATGTGAAGC CAGTAATCTA TAA
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| Protein sequence | MSSQQGFTLI ELMIVVAIIG VLSLIAIPGY QSYAQKTSEA ACLSQTKAFS NQIFLERNDP
TNEFDADKAT RILNTASDKT ACETMVYNDG TSVTPAVMPS VQSKIKNPGS DHTHIICNLD
KSVQCEASNL
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