| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1971 |
|---|
| Symbol | |
|---|
| ID | 5205471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2456327 |
|---|
| End bp | 2456884 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600203 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001280861 |
|---|
| Protein GI | 148653768 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000603125 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTG CCGCCATCCC TTTAATTGAT ATCAGCGCCT CTGAGCTTGT AGATACGCAG
ATAATTGAGC AGTTCTACAC GCCACAGCTA TTACAAAAGG TGCTGACCAC TACGCTTGAC
TTTATGCAGG CGCAATCTGA CGTAGTCTTG CCGTATTTTA GTGAGGTTGA GCCCAGTGTT
TGGCAACATA AGCCCAAACA GCTTGGAGTA TATATCACCG ATGCAGTAGA AGGTCGTGCG
CTTAATTTAG AGGCGCGTGA TAAAGATTAT GCGACCAATA TATTGTCGTA TCCCAGTGAG
CTGCCGGCAT TTATTATTGA GCAAATGCCT GAGCTGGCTT TAGGTGAGCT GATCGTTTGT
CATGACGTGG TTAAGCAGCA AGCCGCTGAG CAGCACAAAA CGGTGGCAGA GCATGTGACC
CATTTATTGG TCCATGGGAT TTTGCATCTA CTCGGCTTTG ATCATGAGCT CGGGCAAGCA
CAGCAAGATG AAATGGAAGG CTTTGAAATT GCGATTCTAG AGCAGCTTGG GATTGGTAAT
CCTTATCTCG CCAGATAG
|
|---|
| Protein sequence | MTSAAIPLID ISASELVDTQ IIEQFYTPQL LQKVLTTTLD FMQAQSDVVL PYFSEVEPSV
WQHKPKQLGV YITDAVEGRA LNLEARDKDY ATNILSYPSE LPAFIIEQMP ELALGELIVC
HDVVKQQAAE QHKTVAEHVT HLLVHGILHL LGFDHELGQA QQDEMEGFEI AILEQLGIGN
PYLAR
|
|---|
| |