Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1835 |
Symbol | |
ID | 5205296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2281464 |
End bp | 2282252 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600066 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001280725 |
Protein GI | 148653632 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000128621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000507933 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTTTAC AACAGATCGT TGGTATCAAG GGTTATATTC AGACCACCTA TCTTGCCGTT TATCCTGACA AATTGCTGCT ATTAGATGCC GGTTGTCGAG CCGATGTAGA TACTATTTTA TCTTATATCA CCGATACCCT ACAGCGGCCT ATACAACAGC TAAAGACAGT GGTAGTCACT CACATGCACC CCGACCATGC AGGCGGCGCT GCAATATTAA GACAAAAGAC AGGCTGTCAG ATTGTTACCT CAGCCAAAGC TGCTACGTGG TACAAAGGCT TAAGTGGGCG CAAGCAGCAT TTAAAAGACT TGGCCTTGAC CTATTATGTG GCCAGCCGCC GAGCAAAGCC GCTTATTAAT CAGTGGTACA ATCCAGTCGT GTCTGCTGAT GTGATTGCCG AAGAAGGCGA TAGAGTAGTG GGCTTTGAAG ATTGGGTCAT TTTACAAACG CCTGGGCACA CCAGTTGTGA CATATCGCTG TGGCATCCCG ATACCAAACA AGCTTACACC GGAGATTTGG TTTTAAAGAT CAATAACAAA TTGGTCTCGC CCTTGGTGAT TCATTTCCCC GATTTATATA AAGCCTCGTT GAGCAAGGTG CAAAACTTGG CGCTAGATAC GCTTATCTTG GCACATGATG GCAAGGTGGC GATTGGTGCA GCAGATTTTG ATCAATTAAT CGCTAAAGTA CCTGATCAGC CTCGAGATAT GAAGCTACTT GATGTACTAG GTATTAAATG GCCTAGAGGC GTTGGTAAGG TGGTAAAAAG GCTAGGCGCA TCCTTATAG
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Protein sequence | MSLQQIVGIK GYIQTTYLAV YPDKLLLLDA GCRADVDTIL SYITDTLQRP IQQLKTVVVT HMHPDHAGGA AILRQKTGCQ IVTSAKAATW YKGLSGRKQH LKDLALTYYV ASRRAKPLIN QWYNPVVSAD VIAEEGDRVV GFEDWVILQT PGHTSCDISL WHPDTKQAYT GDLVLKINNK LVSPLVIHFP DLYKASLSKV QNLALDTLIL AHDGKVAIGA ADFDQLIAKV PDQPRDMKLL DVLGIKWPRG VGKVVKRLGA SL
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