| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1716 |
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| Symbol | |
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| ID | 5204751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2123098 |
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| End bp | 2124237 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640599941 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_001280606 |
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| Protein GI | 148653513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00171564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA CCCCTTACTA TCAAATTGAT ATTGCTGCCT TGAAGCAAAA TCTACAAATT
GTACAGCGTC TGTGTGATCT GTCGGGTGCT AAGGCGTTAT TGGCTTTAAA ATGCTTTGCC
ACTTGGGGGG TGTTTGATGA GATGACGCCT TATCTACATG GCACCACCTC ATCATCTTTA
AATGAGGTGC GCTTGGGCAA AGAAGAGTTT GGTGAGGATA AAGAGACGCA TGCTTATAGT
GTCGCTTATA GTGCAGATGA GATTGATGAG GTGTTAACCT ATGCCGACAA AATCATCTTT
AACTCATTCA ATCAGCTGCA TGCCTTTAAA GACAAAGCCA AAGCTCAAGG CATTCCTGTG
GGTTTGCGTA TTAATCCAAA AACCAGCAAT TCTTCATTTA TTATTGCCGA TCCAGCGCGT
CCTTTTAGCC GTCTGGGTGA GCATGATATC CAAAAAATCA AGCCGGTTAT TGACGACATC
ACTGGGGTTA TGATTCATAA TAATTGTGAA AATAACAGCT TTGAGGCGTT TAGTGACAGT
CTGGCTGATA TTGAAGCTAA GTTTGGGGAG CTGTTTTATC AGCTTGAATG GGTCAGTCTA
GGCGGTGGTA TTCATTTTAT TGCCCCAGAC TACCCGCTAG AGAAATTGGC GCAGCGCTTG
AAGAGCTTTA GTGAAAAATA CGGCGTACAA GTGTATTTAG AGCCAGGCGA GGCCTGTATT
CATAATGCTG CTAAATTGGT CACCACCGTG CTAGATACGC TGCATAATGG TAAGCCACTG
GCCGTGGTGG ATGCATCTAT TGAAGCACAT ATGCTCGACT TATTGATTTA TCGTGAGACT
GCGCCTTTGG TACAGATTAA CGACGAAGCG TGCCAAATTA CCTCGCAGCA AAGCGATGAC
AGCACCATTA TTTATGGTAA ATCTTGCTTA GCCGGTGATA TCTTTGGTGA ATATGCGCTA
GATAAGCCGT TAACTATTGG CGATAAGGTA TCTTTTGGCA ATGCAGCGGG CTACACTATG
GTTAAGAAAA ACTGGTTTAA TGGTGTGGCG ATGCCAGCCA TTGTTATTTG TGATGAGCAA
GGTGAGCTTA CAATCCAAAA AACCTTTGGT TATGAAGACT TTAAAGCCAG TCTATCTTAA
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| Protein sequence | MLKTPYYQID IAALKQNLQI VQRLCDLSGA KALLALKCFA TWGVFDEMTP YLHGTTSSSL
NEVRLGKEEF GEDKETHAYS VAYSADEIDE VLTYADKIIF NSFNQLHAFK DKAKAQGIPV
GLRINPKTSN SSFIIADPAR PFSRLGEHDI QKIKPVIDDI TGVMIHNNCE NNSFEAFSDS
LADIEAKFGE LFYQLEWVSL GGGIHFIAPD YPLEKLAQRL KSFSEKYGVQ VYLEPGEACI
HNAAKLVTTV LDTLHNGKPL AVVDASIEAH MLDLLIYRET APLVQINDEA CQITSQQSDD
STIIYGKSCL AGDIFGEYAL DKPLTIGDKV SFGNAAGYTM VKKNWFNGVA MPAIVICDEQ
GELTIQKTFG YEDFKASLS
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