| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1188 |
|---|
| Symbol | |
|---|
| ID | 5206146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1452874 |
|---|
| End bp | 1453521 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640599408 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001280087 |
|---|
| Protein GI | 148652994 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAGA CTTTAGGAAA GGCAAGCCAA AAAAATGAGA GGCTCAATGA CAAAGCACTT
GCCCCTTTAT CCAAGATACG CCCTGCCACA TTGGATAACA TTGAAAAAGC AGTACATCAG
TTGTTTGCCG GTGATAATGC GCAAGAGGTC ACTATGATCC AAATTGCCAA GGCGGCCAAC
GTCTCATTGC AAACTTTATA TAAGTACTTT GGGGATAAGC AGACCGTGTT CCATACTATT
ATGGATAGAG TGCTCGGCAG GCTCGCTATA CGCATGATGG ATCATTTGCA AGGTATTGAT
AGTGTGGAGG ATAGAATTAG AAAAACACTT TGGGTGGTTT TTGACTTTGT GGATACCCAC
CCTGATGCCG TTATGGTACT TACTTCGATA TCTGCCACGG ACATTCGTAA AATATCTATC
TATGAAAATG AAGAGCTGAT TAAGGCATTT ACCAGTGTCT TGCTAGATGG ACAAAAACGT
GGTGTGTTAA ATGACAGCGT GCCTTTATAT GTGTTATTCG ATGTGTTTAT GGGGTTTGTG
ATGCGTATTG GTATGATGCA AGTGGTTCGC AAAGCCAATA CGCCGCTTAC GGACAGTTTT
GATGATTTGT TCAATATTTT GTGGCGCGCC ATCTCTAAAC CGCAATAG
|
|---|
| Protein sequence | MNQTLGKASQ KNERLNDKAL APLSKIRPAT LDNIEKAVHQ LFAGDNAQEV TMIQIAKAAN
VSLQTLYKYF GDKQTVFHTI MDRVLGRLAI RMMDHLQGID SVEDRIRKTL WVVFDFVDTH
PDAVMVLTSI SATDIRKISI YENEELIKAF TSVLLDGQKR GVLNDSVPLY VLFDVFMGFV
MRIGMMQVVR KANTPLTDSF DDLFNILWRA ISKPQ
|
|---|
| |