| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0643 |
|---|
| Symbol | |
|---|
| ID | 5206330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 773196 |
|---|
| End bp | 774110 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640598859 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001279548 |
|---|
| Protein GI | 148652455 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3751] Predicted proline hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0712073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAG TCGTTAAAAC GACCCTTACA AGCAGCTTAA TTGAAAACAG CTTAAATGAT
AGCCCCTTAA TTGAAATTGA AAGCAACCTT AACACTACCC CTTGCACTCC CCAAGACCCA
ATCACCATAG CCATTCCACC ACCTTTAACT CCCGACGATT TATTGCAATC CAAACAGCTG
GCGCAGCAAG TGCTAAAGCA ACTGCCTCCT GACACAGACT ATTTATCGTT AAGTCCTTCA
CTCAAACAGG CTCTTGTGCC CAAATTTGAT TTAAGCGACA CCCAAAAGAT GCTTCAACAA
GCTGACTTTG CGGTAGATTG GGCAAAAAGA CTTGATGCAG ACATGCTCGA TAGCTTTGTC
AAGCAAGGTT TTATCGTCTT AGATGATCTG TATCAGCCCA CAGCGTTATT GGCGCTGCAA
GCAGAAAGTG GCTTTGTTGA GTATCGAGAT GCCAAGCTGA CTGAAGGCGT ACGCAAAACG
GACATTCGCG GCGATAGAAT TCGCTGGATT ACTAAGGACT TTTTTGCCGG CTTTTACTAT
CTCAACAGCA TTAATGATCT GGCCTTTTTG TTTAATCGCA CCTTATTTGC CGGTATTCGT
CACAGTGAGG CGCATTATGC CTGCTATCCA CCAGGATTTG GTTATAAGTG GCATTCTGAT
AATCCGGTTG GCCGAGATGA GCGGGTAATT TCGGCGGTAT TTTACCTTAA TGATGACTGG
ACACTTGATG ACGGCGGTGA GTTGTCTATT ATAGACAGTG AGGGACAGAC GCATAAGCTT
ATGCCTAAAG CCAATCGTTT GGTTATCTTT GATAGTAACT TGCTGCACCA AGTCGAGCTT
GCCCATCGCC AGCGCTACTC TATTGCCACT TGGCTACGCT GTGATGATGC CCTGCTCATT
GCCGAGCCCC TATAG
|
|---|
| Protein sequence | MASVVKTTLT SSLIENSLND SPLIEIESNL NTTPCTPQDP ITIAIPPPLT PDDLLQSKQL
AQQVLKQLPP DTDYLSLSPS LKQALVPKFD LSDTQKMLQQ ADFAVDWAKR LDADMLDSFV
KQGFIVLDDL YQPTALLALQ AESGFVEYRD AKLTEGVRKT DIRGDRIRWI TKDFFAGFYY
LNSINDLAFL FNRTLFAGIR HSEAHYACYP PGFGYKWHSD NPVGRDERVI SAVFYLNDDW
TLDDGGELSI IDSEGQTHKL MPKANRLVIF DSNLLHQVEL AHRQRYSIAT WLRCDDALLI
AEPL
|
|---|
| |