Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0284 |
Symbol | |
ID | 5206074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 338477 |
End bp | 339499 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640598494 |
Product | glutamate racemase |
Protein accession | YP_001279189 |
Protein GI | 148652096 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTC AAGCTGTAGC TATCAACCAA TCCCAAGATG CCAGTCAAAA AGCGGCTGCC GATGACGATA AGGCGCAGAT GCCGCCTTCT GTTAGTGGCC CCGCGCCCAT AGGGATCTTT GACTCTGGTG TGGGCGGTTT GTCGGTGTAT ATGCACCTGA AGCAGGCACT GCCCCAAGAG CATTTTATTT ATTATGCCGA CACCTTAAAT GTGCCTTATG GGCCTCGGCC AAGCAGTGAA ATTCAGCAGC TAAGCCTGAC GGCAGTTGAC TGGCTGGTGG CTGCAGGCTG TAAGCTGGTA GTGATTGCTT GCAACAGTGC GTCGGCGCAT GCGCTGCATT TGGCACGGCA AAAATACCCG CACATACCTA TTGTCGGGTT GGTCCCCGCA CTTAAGCCTG CCGTATTAAA TAGTACCAGC AAAAATGTGG CGGTACTGGC CACCAAGGCT ACCTTGGATG GGCCGCTATT AAATACAGTT ATTGATGAGT ATGCGCGGCC CTCGCAAGTG ACCGTGATTA AATGGTTTGA TCCTGAATTG GTGCCTTGGG TCGAGGCGGG CATGCCTATG GACAGTGACA CGCCGATGCG ATTAAAGCAG CAGCTGTATC AGTTTGCTCA GCAACAAGTT GATCATCTGG TGCTGGGCTG TACCCATTAT CCATTTTTTA GAGAGTTTGT TTTAGCTGAG GTAGCCAAGC AAGGACTAGA TATTAAAGTA GTCGATTCAG GTGCTGCCAT TGCGGCCCGA GTTAAAGCCT TGCTGCAGCA GCAAGCGGCG GCTGAATCCA GTACTGCGCG CTTGGGCCAT AAGTTTCTTT TGCCCACTCA ATCTGTCCTA CACAGCATGC AAGGGCTGTC TGTGGGGCAT ACCACACAAC GTCACACAGA CCGTCTTAGC GATTTAGAGC CGCAACACGC GTCAAGCTTA GCGGTGCCCA AGCTGGCATT TTTCGTCTCC GATCCCAAAG CAGATTTGGC ACAGGTATCA ACTATGGTGC AGCGATTAAT CTATCCGGTG TAA
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Protein sequence | MTTQAVAINQ SQDASQKAAA DDDKAQMPPS VSGPAPIGIF DSGVGGLSVY MHLKQALPQE HFIYYADTLN VPYGPRPSSE IQQLSLTAVD WLVAAGCKLV VIACNSASAH ALHLARQKYP HIPIVGLVPA LKPAVLNSTS KNVAVLATKA TLDGPLLNTV IDEYARPSQV TVIKWFDPEL VPWVEAGMPM DSDTPMRLKQ QLYQFAQQQV DHLVLGCTHY PFFREFVLAE VAKQGLDIKV VDSGAAIAAR VKALLQQQAA AESSTARLGH KFLLPTQSVL HSMQGLSVGH TTQRHTDRLS DLEPQHASSL AVPKLAFFVS DPKADLAQVS TMVQRLIYPV
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