| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5276 |
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| Symbol | |
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| ID | 5191450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5923476 |
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| End bp | 5924324 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589759 |
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| Product | transketolase domain-containing protein |
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| Protein accession | YP_001270578 |
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| Protein GI | 148550476 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA ACGCACCCGA CACTTCGCTC TCGGCGCTCG CCGAACGCGC GTACAACATT
CGCCGCCACG CCCTGCGCAT GGGGCAGGTC CAGGGCCAGG GTTATGTCGG CCAGGCCCTC
GGCGCCGCTG ACTTGCTGGC CGTGTCGTAC TTCCATGCGC TGCGCTATCA GCCCCACAAC
CCCGAATGGG AGCAACGCGA CCGCTTTTAC CTGTCCATCG GTCACTACGC CATCGCCCTG
TATGCAGCGC TGATCGAAGC CGGCGTGATC CCCCTGGAGG AACTGGAAAC CTATGGTTCG
GACGACAGCC GCCTGCCGAT GTCGGGCATG GCCGCTTACA CGCCGGGCAT GGAAATAACC
GGGGGGTCGC TCGGCCACGG CTTGGGCATA GCGGTCGGCG CCTGCCTGGG CCTGAAACGC
AAGAACTCGG ATTCGTTTGT CTACAACCTG CTCTCGGACG GCGAATTGAA CGAGGGTTCA
ACCTGGGAAG CCGCGATGTC GGCCTCACAT TGGAAACTGA ACAACCTCAT CGCAATCGTC
GACGTCAACA ACCAGCAAGC CGACGGCTAC TCCAGCGAAG TGCTGGCCTT CGAGCCCATC
GTTGACCGTT GGCAGGCGTT TGGCTGGTTT ACCCAGCGCG TGGACGGCAA CGACATCGGC
GCCCTGGTCG CCGCGTTCGA CGCCGCACGC AACCATCAAG GGGCACAGCC GCGGGTCATC
ATCTGCGATA CCAAGATGGG CAAGGGTGTG GACTTTCTCG AGTCACGTGA AAAAACCCAC
TTCATCCGCG TCGATGAAAA CGAGTGGGAT CTGGCATTGC AAAACCTTCA GGTCGGGAGA
ACTGTATGA
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| Protein sequence | MTVNAPDTSL SALAERAYNI RRHALRMGQV QGQGYVGQAL GAADLLAVSY FHALRYQPHN
PEWEQRDRFY LSIGHYAIAL YAALIEAGVI PLEELETYGS DDSRLPMSGM AAYTPGMEIT
GGSLGHGLGI AVGACLGLKR KNSDSFVYNL LSDGELNEGS TWEAAMSASH WKLNNLIAIV
DVNNQQADGY SSEVLAFEPI VDRWQAFGWF TQRVDGNDIG ALVAAFDAAR NHQGAQPRVI
ICDTKMGKGV DFLESREKTH FIRVDENEWD LALQNLQVGR TV
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