Gene Pput_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5020 
Symbol 
ID5194297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5647534 
End bp5647977 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID640589505 
Producthypothetical protein 
Protein accessionYP_001270324 
Protein GI148550222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.788021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TTCTCGATTG TGAGTTCACT CAGCTCACCG CGCAGGCAAA GCTGATCTCC 
CTGGCTCTGG TTGGCCAGGA TCGCCGGGAA TTCTACGTGG AAGTGAGCGA TGCGTGGCGA
GAAGAAGACT GCAGTGAGTT CGTGAAGGAG ATCGTACTGC CGCAGTTGTG GGGTGGTGAG
TACGCCATGC CAATCATCGA GGCTAGAGCG GCGCTCCTGC GGTTCCTGGC AACCTACGAC
GAAGAGCTTG AGGTTGTCAC AGACGCACCT GCCTACGACT GGGAGCTGTT CTGCGAGCTC
GCCTATGACG ATGGGAAATG GCCCAAGAAC GTCAGGAACT TCCCCACCGA TGCCACGACC
CTGGCCGCGA CGAACGATGG GGAAGAACTG CCTCACCATG CCCTGCTGGA CGCTAGGATC
ATCGCTGGTA TGTCCAGGTC ATGA
 
Protein sequence
MKLFLDCEFT QLTAQAKLIS LALVGQDRRE FYVEVSDAWR EEDCSEFVKE IVLPQLWGGE 
YAMPIIEARA ALLRFLATYD EELEVVTDAP AYDWELFCEL AYDDGKWPKN VRNFPTDATT
LAATNDGEEL PHHALLDARI IAGMSRS