| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4950 |
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| Symbol | |
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| ID | 5193552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5568701 |
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| End bp | 5570302 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589435 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001270254 |
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| Protein GI | 148550152 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.663917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTT TGCATGCCGA TGAGGCCTTT CTCGACCATT ACCAGTTGAG CCATGATCCG
TTCGCGCCCC GCGTACCTGG CTTCAAGTTC TTCCCGGCCC AGCGCAAACC GGTGCTCGGC
CAACTGCACC ACCTGGCGCG CTATAGCCAG TTGATGCTGG TGGTCAGCGG CCCGTTGGGC
AGCGGCAAGT CGCTACTTCG CCAGGCCCTG GTGGCCAGCA CCAACAAGCA GACTGTGCAA
AGTGTGGTGG TGTCGGCCCG CAGCGCCAGC GACGCCTCCA GTATGCTCGC GCAGGTCGCG
CAGGAGCTGG GTGTGGCCCA GCCCGAGGTG CAGGCGATCC TGTCGAAGGT GGTGCAGCTG
GCACTGACCG GGCAGGAAGT GTATTTGCTG GTGGACGATG CGGAACAACT CGACGAGTCG
GCACTCCAAG CGTTGCTGGA GTTGGCGGCG GGGGTTCCTG AAGGGCGTCC GCACGTGTTT
CTGTTCGGTG AGCCATCGCT GATTGCCGGG CTGGATGAGC TCAATGTCGA GGAAGAACGT
TTCCACATCA TCGAGCTTGC GCCCTACAGT GAAGAAGAAA CCCGCGAGTA CCTGGAACAG
CGCCTGGAAG GGGCTGGTCG GGGCATCGAG GTGTTCAGCC GTGAACAGAT CGCCGATATC
CATGAAAACT CCGACGGCTG GCCTGGCAAC ATCAATCAGG TCGCCCGTGA CACTTTGATC
GAAGCCATGA TCGCCAGCCG CTCGACGGCC AAGCGACCAA CCATGGGGTT CAAGATGCCT
AAAAAACATG TGCTCGCACT GTCCGCTGTG GTCGTGGTTG CCGTTGCGGC CGCGGTATTG
ATGCCCAAGA AAGGCGACAA GGCCCCTGCC GAAGCGCCGG CCGCCCAGGC CCAGTTGCCG
CTGGGTGACG GCAAGCAGGG TGCCGCCATC GAGTTCTCTG GCTCGTCCCA GCCAATGCCG
CTGCCACTGG TTGGCCAGTC GCAGCCGGTG ATGCGCGAGC CGCTGGCCCA AGCCGCAGGC
ATGGGCGAGG GTGAAGAGGG AGGCCCGGCT GTCGACACCG CGCTGCAGCC TGGCAACCCA
CCACCCACCG TGACCACCAT CGCTCCGCCA CAAGGTGTGC CAGCTGGCCC GGCGCCTGCC
CCGGCCCAGC CAGTTCAGTC GGTTGCGCCT GCGCCCAAGC CTGTTGCAAC CCAGCCCGCG
AAACCGGTTG CGCCGGCCAA GCCAGCACCC GCGCCGACCC AGGTCGCCGT GGCCAAGCCG
GCCGCCAAAG CTGCCGAAAA ACCAGCTGAA AAACCAGCCT CCGCTAGCGC TGGCAACAGC
GGCTGGTATG CCGGACAGAA GCCGGGCAAT TACGTGGTGC AGATCCTCGG TACCAGCTCC
GAGGCGTCGG CCCAGGCTTA CGTCAAGGCC CAGGGTGGCG ACTATCGCTA CTTCAAGAAA
AACCTGCAGG GCAAACCCTT GTACGTCGTG ACTTACGGCA GTTTCGCCAA CCGCGACGCA
GCGGTAGCGG CAATCAAGAA CTTGCCAGCG AAGGTCCAGG CTGGTAAACC TTGGCCACGT
ACCGTCGGCA GCGTCCAACA AGAGCTGGCC ACGGCCCGCT GA
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| Protein sequence | MTSLHADEAF LDHYQLSHDP FAPRVPGFKF FPAQRKPVLG QLHHLARYSQ LMLVVSGPLG
SGKSLLRQAL VASTNKQTVQ SVVVSARSAS DASSMLAQVA QELGVAQPEV QAILSKVVQL
ALTGQEVYLL VDDAEQLDES ALQALLELAA GVPEGRPHVF LFGEPSLIAG LDELNVEEER
FHIIELAPYS EEETREYLEQ RLEGAGRGIE VFSREQIADI HENSDGWPGN INQVARDTLI
EAMIASRSTA KRPTMGFKMP KKHVLALSAV VVVAVAAAVL MPKKGDKAPA EAPAAQAQLP
LGDGKQGAAI EFSGSSQPMP LPLVGQSQPV MREPLAQAAG MGEGEEGGPA VDTALQPGNP
PPTVTTIAPP QGVPAGPAPA PAQPVQSVAP APKPVATQPA KPVAPAKPAP APTQVAVAKP
AAKAAEKPAE KPASASAGNS GWYAGQKPGN YVVQILGTSS EASAQAYVKA QGGDYRYFKK
NLQGKPLYVV TYGSFANRDA AVAAIKNLPA KVQAGKPWPR TVGSVQQELA TAR
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