Gene Pput_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4110 
Symbol 
ID5192801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4620824 
End bp4621168 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID640588587 
Productphage head-tail adaptor, putative 
Protein accessionYP_001269418 
Protein GI148549316 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC ACGCAGGGAA ACTGCGGCAC CGAATCGAGA TTCAGCACAA GGTCACTCCA 
CGCGACCCTC AGACGCTGGA GTACGGCGAG CCCGCATGGG AGGCCTTCGC CAAGCCTTGG
GCTGATGTTA CGCCATTATC TGCCCGTGAT CTGCTCGCAG CACAGGCGGC CCAGTCGGAA
GCTACAGCCC GTATGGTGAT CCGTTATCGC CCAGGCGTGC TGCCAACCAT GCGCATTGTC
TATCGAGGCG AGATTTACAG CATCGAAGGT CCTCCGCTTG AAGACGCCGA CTCCGGTCTG
GAATATCTGA CCATCTTGGT CTCAAAGGGG GTGAAGGATG GCTGA
 
Protein sequence
MSIHAGKLRH RIEIQHKVTP RDPQTLEYGE PAWEAFAKPW ADVTPLSARD LLAAQAAQSE 
ATARMVIRYR PGVLPTMRIV YRGEIYSIEG PPLEDADSGL EYLTILVSKG VKDG