| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3743 |
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| Symbol | |
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| ID | 5191799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4193086 |
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| End bp | 4193850 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588199 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001269051 |
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| Protein GI | 148548949 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTA TCACGCCCAA CATTCCCCAT GAAGTCGAAG GCAAAGTCGC GCTGGTCACC
GGCGCCGCCA GTGGCATCGG CAAGGCAATT GCGCTTTTGC TGCATGCACG TGGCGCCAAG
GTCGTTGCCG AAGATATCGA CCCTGCCGTA GAAGACCTCG CACGTCCAGG GCTGGTCCCA
CTGGTGGCGG ACATCAGCGA AGATGGCGCT GCAGAACGTG CCGTCGGCCT TGCCGTCGAG
CAGTTCGGCC GGCTGGACAT CCTGGTGAAT AACGCCGGGA TCATCATCAA CAAACTGGTC
ATCGACATGA CCCGCGAAGA CTGGGAGCGC ATCCAGGCGG TTAATACCAC CGCGGCCTTT
CTGCATTGCC GCGAGGCAGT CAAGGCAATG ATGCCTAACA AGTCCGGCGC AATCGTCAAT
ATCGCCTCCT ATGCCGCCTA CTTCGCCTTT CCAACCATCG CGGCCTACAC CGCCTCCAAG
GGTGCGCTGG CACAGCTGAC CCGTACGCTG GCACTCGAAG CCATCGAGTA CGGTATCCGC
GTCAATGCCA TCGGCGTCGG CGACGTGGTC ACCAACATCC TCAATGACGT GGTCGAAGAC
GGTCCTGGCT TTCTTGCCAA GCACGGCGAA GCGGCCCCCA TCGGCCGTGC CGCACAGCCG
GAAGAAATTG CCGAGCTCGT CGCGTTTCTC GCGTCCGAAC GGGCCAGCTT CATGGTCGGT
TCGGTTGTCA TGGCCGACGG CGGCATGACC GTGACCGCCG GTTGA
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| Protein sequence | MTTITPNIPH EVEGKVALVT GAASGIGKAI ALLLHARGAK VVAEDIDPAV EDLARPGLVP
LVADISEDGA AERAVGLAVE QFGRLDILVN NAGIIINKLV IDMTREDWER IQAVNTTAAF
LHCREAVKAM MPNKSGAIVN IASYAAYFAF PTIAAYTASK GALAQLTRTL ALEAIEYGIR
VNAIGVGDVV TNILNDVVED GPGFLAKHGE AAPIGRAAQP EEIAELVAFL ASERASFMVG
SVVMADGGMT VTAG
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