Gene Pput_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3399 
Symbol 
ID5194395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3814577 
End bp3815152 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content53% 
IMG OID640587847 
Producthypothetical protein 
Protein accessionYP_001268709 
Protein GI148548607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0015092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA ACGAGCGCAA GGTCGCCCAA ATGGCGGCTT TTTTTCTCCA ACGGAATGGC 
GGAAGCTTAT CTATCCTGAA ATTGATGAAG CTTCTCTATC TCGCTGACCG TAAGGCGCTT
GATGTTTATG AGGAGCCTAT TTCAGGCGAT CGCATGGTCT CCATGCCGCA TGGCCCTGTT
TTGTCCAGAA CCTACGAGCT GATGAATGGG GCTGGGTGTT CAGTTGACAA AGGATGGGAC
AGCTGGGTGG CCGACCGCGC CGACCGTATG CTTAGCCTCA AAGAGTGCCA CATTTCGTCA
AACGACCTGG ACCTACCCGC GCTGAGCGAG TCGGATCTGG AGGTGCTGAG CGAGACTCAA
GCCGAGTACG GCGACAAAGA GGCCTGGGTC CTGCGAAACT ACACCCATGA TAAATGCGCA
GAATGGGAGG ACCCAAATGG ATCCTCTCGT CCGATCAGCT ATGAATCGGT CTTCAGAGCT
CTCGGTAGAG ATCCGGAAAG CGCTAAATCA GCTCAGCAGA GAATCGAAAG CTTCAACAGC
ACGGACGAGC TTTTTTCGAG GATCAGATGT TCATAG
 
Protein sequence
MAFNERKVAQ MAAFFLQRNG GSLSILKLMK LLYLADRKAL DVYEEPISGD RMVSMPHGPV 
LSRTYELMNG AGCSVDKGWD SWVADRADRM LSLKECHISS NDLDLPALSE SDLEVLSETQ
AEYGDKEAWV LRNYTHDKCA EWEDPNGSSR PISYESVFRA LGRDPESAKS AQQRIESFNS
TDELFSRIRC S