Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3399 |
Symbol | |
ID | 5194395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3814577 |
End bp | 3815152 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640587847 |
Product | hypothetical protein |
Protein accession | YP_001268709 |
Protein GI | 148548607 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0015092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCA ACGAGCGCAA GGTCGCCCAA ATGGCGGCTT TTTTTCTCCA ACGGAATGGC GGAAGCTTAT CTATCCTGAA ATTGATGAAG CTTCTCTATC TCGCTGACCG TAAGGCGCTT GATGTTTATG AGGAGCCTAT TTCAGGCGAT CGCATGGTCT CCATGCCGCA TGGCCCTGTT TTGTCCAGAA CCTACGAGCT GATGAATGGG GCTGGGTGTT CAGTTGACAA AGGATGGGAC AGCTGGGTGG CCGACCGCGC CGACCGTATG CTTAGCCTCA AAGAGTGCCA CATTTCGTCA AACGACCTGG ACCTACCCGC GCTGAGCGAG TCGGATCTGG AGGTGCTGAG CGAGACTCAA GCCGAGTACG GCGACAAAGA GGCCTGGGTC CTGCGAAACT ACACCCATGA TAAATGCGCA GAATGGGAGG ACCCAAATGG ATCCTCTCGT CCGATCAGCT ATGAATCGGT CTTCAGAGCT CTCGGTAGAG ATCCGGAAAG CGCTAAATCA GCTCAGCAGA GAATCGAAAG CTTCAACAGC ACGGACGAGC TTTTTTCGAG GATCAGATGT TCATAG
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Protein sequence | MAFNERKVAQ MAAFFLQRNG GSLSILKLMK LLYLADRKAL DVYEEPISGD RMVSMPHGPV LSRTYELMNG AGCSVDKGWD SWVADRADRM LSLKECHISS NDLDLPALSE SDLEVLSETQ AEYGDKEAWV LRNYTHDKCA EWEDPNGSSR PISYESVFRA LGRDPESAKS AQQRIESFNS TDELFSRIRC S
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