Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2952 |
Symbol | |
ID | 5193031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3333257 |
End bp | 3333985 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587398 |
Product | hypothetical protein |
Protein accession | YP_001268264 |
Protein GI | 148548162 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.916913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGGAC GGTACTCGAT GTATGAGTCG ATGGATCACT ACCTGCGCCA GCTATCGCTG GACCTGGTGG TGATCAATGG ATATGACCAC GAGCCACTCA GCCGCTTCAA CGTGGCGCCT TCGACGCGTG TCGAAATCAT TCGCCAGATC GGAGAAGGCC TGAGTGTGGA ACGCGTCAAA TGGGGATGGT CGCCATTTTG GGCGAAGGGG AAGCGTCCCG ACCCGATCAA TGCTCGAGCA GAAACGGTGA TGACGGGGAG GTTTTTCAAG GGGTTGTGGC CAGACGGCAG AGCGCTAGCC CCTGCAAATG GCTGGTTCGA GTGGATCCCG GACCCAGCAG ACCCCAAGCG AAAGCAGCCG TACTACATCA CGAGCGCCGA CGGCGGCCCG CTTTTCTTCG GCGCACTTGC GCAGGTGCAC CAGGGAATCG AACCGGACGA CCGCGATGGA TTCGTGGTTA TCACTGCAGC TGCAGATCAA GGCTTGGTCG ACATCCACGA CAGAAAACCT CTGGTGCTTG CACCTGATGT GGCAAGGGAA TGGTTGGACC CAGGCACATC GCCCGAACGC GCTGCGGCGA TCATAGAGAC GGGATGCCGC CCGGCAGAGA ATTTTCGATG GTACCCGGTC GGCAAGGCTG TCGGTAACGT GCGCAATCAA GGGCCAGAGC TGATTGAGCC GGTTAGTGAG CAGGACCGCC ACGGCCGCCA AGGCGACCTA GAGCTTTGA
|
Protein sequence | MCGRYSMYES MDHYLRQLSL DLVVINGYDH EPLSRFNVAP STRVEIIRQI GEGLSVERVK WGWSPFWAKG KRPDPINARA ETVMTGRFFK GLWPDGRALA PANGWFEWIP DPADPKRKQP YYITSADGGP LFFGALAQVH QGIEPDDRDG FVVITAAADQ GLVDIHDRKP LVLAPDVARE WLDPGTSPER AAAIIETGCR PAENFRWYPV GKAVGNVRNQ GPELIEPVSE QDRHGRQGDL EL
|
| |