Gene Pput_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2952 
Symbol 
ID5193031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3333257 
End bp3333985 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID640587398 
Producthypothetical protein 
Protein accessionYP_001268264 
Protein GI148548162 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.916913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAC GGTACTCGAT GTATGAGTCG ATGGATCACT ACCTGCGCCA GCTATCGCTG 
GACCTGGTGG TGATCAATGG ATATGACCAC GAGCCACTCA GCCGCTTCAA CGTGGCGCCT
TCGACGCGTG TCGAAATCAT TCGCCAGATC GGAGAAGGCC TGAGTGTGGA ACGCGTCAAA
TGGGGATGGT CGCCATTTTG GGCGAAGGGG AAGCGTCCCG ACCCGATCAA TGCTCGAGCA
GAAACGGTGA TGACGGGGAG GTTTTTCAAG GGGTTGTGGC CAGACGGCAG AGCGCTAGCC
CCTGCAAATG GCTGGTTCGA GTGGATCCCG GACCCAGCAG ACCCCAAGCG AAAGCAGCCG
TACTACATCA CGAGCGCCGA CGGCGGCCCG CTTTTCTTCG GCGCACTTGC GCAGGTGCAC
CAGGGAATCG AACCGGACGA CCGCGATGGA TTCGTGGTTA TCACTGCAGC TGCAGATCAA
GGCTTGGTCG ACATCCACGA CAGAAAACCT CTGGTGCTTG CACCTGATGT GGCAAGGGAA
TGGTTGGACC CAGGCACATC GCCCGAACGC GCTGCGGCGA TCATAGAGAC GGGATGCCGC
CCGGCAGAGA ATTTTCGATG GTACCCGGTC GGCAAGGCTG TCGGTAACGT GCGCAATCAA
GGGCCAGAGC TGATTGAGCC GGTTAGTGAG CAGGACCGCC ACGGCCGCCA AGGCGACCTA
GAGCTTTGA
 
Protein sequence
MCGRYSMYES MDHYLRQLSL DLVVINGYDH EPLSRFNVAP STRVEIIRQI GEGLSVERVK 
WGWSPFWAKG KRPDPINARA ETVMTGRFFK GLWPDGRALA PANGWFEWIP DPADPKRKQP
YYITSADGGP LFFGALAQVH QGIEPDDRDG FVVITAAADQ GLVDIHDRKP LVLAPDVARE
WLDPGTSPER AAAIIETGCR PAENFRWYPV GKAVGNVRNQ GPELIEPVSE QDRHGRQGDL
EL