Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2723 |
Symbol | |
ID | 5192022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3097544 |
End bp | 3098485 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640587175 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001268041 |
Protein GI | 148547939 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.645854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CCAATCACTA TTCGACCCTT GCCGTTTCGC CATCCCGTCG CTTTGATTAC TGGCGGGAGG TGGTCTGCCG CCATTGTTTG TCGGCAGACA GCAAACCCTC GTCGCAGAGC AACTTCGAGG GTGCGCTGCA GGTCAACGGC ATCGGCCCTT TGGATGTCAC GACGCTGTCG TCGCCGCTGC ACCACTGGGT GCGCTCCGAG CAGCACCTGC GCAGCGACCC CGCCGAAGAC ATATGGTTGG GTGTCACCCT CGACGGCTAC GGCGAAATTG AACAACACAA CCGCAAGGCC AGGCTCACGG CCGGCAATGT GTTTCTTTAC GACGCAACCC AACCGTTTCG ATTCAGCCTG GGTGGTACCG AAAACCACCT TATCCGCATC CCCCGGCCGC TGCTCGCACA GCGCGTCCCG CACATCGCTG ACATCACCGC GCTGGTACTG GAAGAGGGGC GCCCCGGAGT GATCCCGCTG CGGCAGATGA TTGGCCAAGC GGCCAGTTCT GCGCCATTGC TGCAGGACGA AGGCGTCTCT CGGCGGTACT CCAACACCAT CGTCGACCTG CTGGTGCTCA GCCTTGAGTT GCAGGACCTG AAGACTACCC ATCGAGAACT GGATCTTTAT GGGCGAATCA TGAACTACAT TCAACGCCAT TTGACTGAGC CGGAGCTGTC AATCGAGTCG ATTGCCCTGG CACATCACGT GTCGACACGG ACGGTGACAC GTGCGTTTGC CCGGCATCAG AAGTCACCGG TTGCCGAGAT CTGGAAGGAG CGGCTGAATG CTAGTCGCGC AGCGATTGAG TGTGGGCAGG TAAGGAGTGT TTCGCAGGCG GCGTTGGAGT ATGGCTTTTC GGACTTTTCG CATTTTAGCC ATGCGTTTCG CAAGGCGTTT GGAGTGGCGC CGCATTCGTT GTTACGGCGC AGTAGGGGGT GA
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Protein sequence | MAETNHYSTL AVSPSRRFDY WREVVCRHCL SADSKPSSQS NFEGALQVNG IGPLDVTTLS SPLHHWVRSE QHLRSDPAED IWLGVTLDGY GEIEQHNRKA RLTAGNVFLY DATQPFRFSL GGTENHLIRI PRPLLAQRVP HIADITALVL EEGRPGVIPL RQMIGQAASS APLLQDEGVS RRYSNTIVDL LVLSLELQDL KTTHRELDLY GRIMNYIQRH LTEPELSIES IALAHHVSTR TVTRAFARHQ KSPVAEIWKE RLNASRAAIE CGQVRSVSQA ALEYGFSDFS HFSHAFRKAF GVAPHSLLRR SRG
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