| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2409 |
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| Symbol | |
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| ID | 5195215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2753262 |
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| End bp | 2754407 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586866 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001267732 |
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| Protein GI | 148547630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACC TTGATCCCGG CGATGAAATA GCCTACTCCG TACGGAGGGA TCGGCTTGAA
CAGCTGTTTG TCCAGTCGGC GCCCGCTGTG CTTGGCAGCT TCCTGGCCGC CGTCATGCTG
TGCTGGTTGG GCTGGGAGCG TTTCGACCCG CAAAGGGTCA TCGTGTGGAT GACGTTATTG
GGCCTGTCGA CCGGCGTGCG TACCGCCATG TTCTTCGCCT ATCTGCGAGC ACCGGCCAAC
CAGCGCACGG CCGAACGCTG GGAGTGGCGT TACTGGGTCA CGCTGATGCT GTCGGCGGCT
ATCTGGGGCT GGGGCGCCTT TGCCGTAATG CCCACCGACG ACGCGCTGGG GCAGACGCTG
ATCATGTTGT TTGCCGTCGG CATGTCTGTC AGCGCGGTGT CGTGTTACTC CTCCTACCGC
AACATGACCC TGGTGTCGAT GGGCCTGGTC TTGCTGCCTT CTACAGGCTG GCTACTGTTG
CAACCTTCCA CACTGCAACA AGGGATAGCC TTGGCGGTGC TGGTGTTCGC CTGGTTCGTG
GTCAGCGCGA CGCAAAGCCT GTCCTCGGCA TTGACGACGG CCTGGCGCCT GAAACACGAA
ATGCAACGCG CGCATCGGCT TGCCATGGTG GCCTCGTGCA CGGACGAACT GACCGGCCTG
AACAACCGAC GTGCTTTTTT CGACAACGCT TCGGCGCAGC ACGCCCAGTG CAGGGATGCG
GGTAAATTCA TGGCCGTGTT GATGCTGGAC GTCGACCATT TCAAACAGAT CAACGACACG
TTCGGGCATG CCGCAGGCGA CCAGGTACTG CAGCGCATCG GTGCAGCGAT CAGTGCCAGC
CTGCGTGACA ACGACATTGC CGGCAGGCTG GGCGGTGAGG AGTTCGCCAT CCTGCTGCCC
AATACGCCGC CAGACACGGC GATTGAGGTT GCCGAGCGCC TGCGGGCCCT GATAGCCAAA
CTGCGTGTGA ATGATGAACA CCCGGTCACC GCAAGCATAG GTTTAGCGTT CGCGAAGGCC
CCTGCCACTG AGCTCGGCGC CTTGCTCAGC AGCGCAGACA GCGCCATGTA CCTTTCCAAG
GTATCGGGCC GTAACCGGGT CACGGTCGCC GAACCGGAGC AGGAGGCATT GCACAAGCAG
CACTAG
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| Protein sequence | MTNLDPGDEI AYSVRRDRLE QLFVQSAPAV LGSFLAAVML CWLGWERFDP QRVIVWMTLL
GLSTGVRTAM FFAYLRAPAN QRTAERWEWR YWVTLMLSAA IWGWGAFAVM PTDDALGQTL
IMLFAVGMSV SAVSCYSSYR NMTLVSMGLV LLPSTGWLLL QPSTLQQGIA LAVLVFAWFV
VSATQSLSSA LTTAWRLKHE MQRAHRLAMV ASCTDELTGL NNRRAFFDNA SAQHAQCRDA
GKFMAVLMLD VDHFKQINDT FGHAAGDQVL QRIGAAISAS LRDNDIAGRL GGEEFAILLP
NTPPDTAIEV AERLRALIAK LRVNDEHPVT ASIGLAFAKA PATELGALLS SADSAMYLSK
VSGRNRVTVA EPEQEALHKQ H
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