| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2248 |
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| Symbol | |
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| ID | 5192708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2558421 |
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| End bp | 2559428 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586705 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001267571 |
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| Protein GI | 148547469 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCACGC CACGCCAGTT CAGCCAAAAG ACCAGCACCA GCAACATGCT ACGGCTCAAA
ACAAGCAGCG CCAATGCCCA GGCGCCCTAT CGGGTCGACT TTATCCTGCT CGAACACTTC
TCGATGGCCA GTTTCACGGT GGCCATGGAC GTACTGGTGA CGGCCAACCT GCTACGTGCC
GACAGCTTCC AGTTCACCCC GCTGTCGCTG GACGGCGACC GGGTGCTCAG CGACCTGGGG
CTGGAACTGG TGGCCACCGA GCTGTCCGCT GCGGCGCTGA AGGAGCTGGA CCTGTTGGTG
GTCTGCGGCG GCTTGCGCAC ACCACTCAAG TACCCGGAAC TCGATCGCCT GCTGGACGAT
TGCGCGGCCC ACGGCATGGC CTTGGGCGGC TTGTGGAACG GCGCCTGGTT CCTTGGCCGT
GCCGGGGTGC TGGACGACTA CGGTTGCAGC ATCCACCCCG AGCAACGTGC CAGCCTGTCG
GAGCGCAGCC CGCAAACCCG CATCACCCCG GCCAGCTTTA CCCTCGACCG TGACCGCCTC
AGCGCCGCCA GCCCCAATGG CGCCATGGAG CTGATGCTGG GCCTGGTACG CCGGCTGTAT
GGTGATGGCC TGGCCGAAGG TGTCGAGGAA ATCCTGTCAT TCTCCGGTGC GCGCTACCGC
CAGGTGGGTC CTGGGGCGAA GAAGTCCATG AGCCTGCACC TGCGCACCAT TGTCGAGCTG
ATGGAGAACA ACCTCGAGGA AACCCTCAGC CTCGACCAGT TGGCCGCCTA CAGCGGGCGC
TCGCGGCGGC AGATCGACCG CCTGTTCCAG GCCCAGCTGG GCACGTCGCC CCGGCGCTAT
TACATGGAGC TGCGCATCAC CAAGAGCCGC CGGCTGCTGC AGTATTCCGA CCTGTCGGTG
ATGGAAGTGG CAGTGGCCTG CGGGTTTGTC TCGGTGTCGC ACTTCAGCAA GTGCTATGCG
GCGTATTTCG GCTACCCGCC GTCGCGCGAG CAACGGCTGG GCGAGTGA
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| Protein sequence | MPTPRQFSQK TSTSNMLRLK TSSANAQAPY RVDFILLEHF SMASFTVAMD VLVTANLLRA
DSFQFTPLSL DGDRVLSDLG LELVATELSA AALKELDLLV VCGGLRTPLK YPELDRLLDD
CAAHGMALGG LWNGAWFLGR AGVLDDYGCS IHPEQRASLS ERSPQTRITP ASFTLDRDRL
SAASPNGAME LMLGLVRRLY GDGLAEGVEE ILSFSGARYR QVGPGAKKSM SLHLRTIVEL
MENNLEETLS LDQLAAYSGR SRRQIDRLFQ AQLGTSPRRY YMELRITKSR RLLQYSDLSV
MEVAVACGFV SVSHFSKCYA AYFGYPPSRE QRLGE
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